Acylpiperazines as Inhibitors of Transglutaminase and Their Use in Medicine

ABSTRACT

The present invention relates to novel compounds of Formula I capable of inhibiting tissue transglutaminase, and uses of the same in medicine. In particular, the invention provides compounds for use in the treatment of prevention of disease and conditions such as fibrosis (e.g. cystic fibrosis), scarring, neurodegenerative diseases (e.g. Alzheimer&#39;s disease, Huntington&#39;s disease and Parkinson&#39;s disease), autoimmune diseases (e.g. multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (e.g. cancers), AIDS, psoriasis and inflammation (e.g. chronic inflammatory diseases).

FIELD OF THE INVENTION

The present invention provides novel compounds with transglutaminase inhibitory activity, and uses thereof in medicine.

INTRODUCTION

Transglutaminases (TGs or TGases) are a group of enzymes able to modify proteins by mediating an acyl-transfer reaction between the γ-carboxamide group of peptide-bound glutamine and a primary amine. The result of this reaction is post-translational modification, either through protein crosslinking, if the amine is the ε-amino group of peptide-bound lysine, or modification of the peptide glutamine by crosslinking to a primary amine such as a polyamine. Under certain conditions and in the absence of a suitable primary amine, the deamidation of peptide bound glutamine can also occur. Because of their ability to crosslink proteins into high molecular weight protein aggregates TGs have been termed as “Nature's Biological glues” (Griffin et al., 2002). TGs are found widely in nature, but in mammals their enzymatic activity is Ca²⁺-dependent, and other factors including GTP/GDP can also affect the activity of some of the mammalian TGs (Verderio et al., 2004). Not all of the eight active members (TG1-7 and factor XIII) of the mammalian TG family have been fully characterized (Collighan and Griffin, 2009). Another member of this family, band 4.2, is catalytically inactive and is mainly associated with the regulation of the erythrocyte cytoskeleton. TG2 (tissue transglutaminase, TG2M, tTG) is probably the most ubiquitous member of the mammalian TG family which is found both in the intra- and extra-cellular environment. In addition to its transamidating, GTPase and ATPase activity (Nakaoka et al., 1994), further novel activities have recently been reported for TG2 e.g. the protein disulfide isomerase (PDI) (Hasegawa et al., 2003) and protein kinase activities (Mishra and Murphy, 2004), thus further extending the potential physiological and pathological importance of this diverse group of enzymes. Abnormal levels of transglutaminase particularly TG2 and /or activity have been observed in many disease states, like celiac sprue, neurodegenerative diseases (Alzheimer, Parkinson, Huntington disease), fibrosis, cataract, cancer metastasis, and the list is certainly not intended to be exhaustive. Moreover, proof of concept studies using either TG2−/− animal models (Bailey and Johnson, 2005; Mastroberardino et al., 2002) or inhibitor studies (Huang et al., 2009; Johnson et al., 2008) have shown the enzyme to be a potential novel candidate for therapeutic intervention.

Due to its implication in a wide variety of biological processes and pathologies, developing chemicals tools to further investigate TG2s multifunctional roles is an active research area.

Most of the inhibitors developed so far target the enzyme's catalytic site, but there are also reports of small molecules competing for the TG2 cofactor binding site. Depending on their ability to reach and react with the catalytic cysteine residue (CYS277 in case of hTG2), they can further be divided into reversible and irreversible inhibitors. Peptidic inhibitors bearing various electrophilic moieties (e.g. chloroacetamides (Pardin et al., 2006), α,β-unsaturated amides (Pardin et al., 2006), maleimides (Halim et al., 2007), sulfonium methyl ketones (Griffin et al., 2008), dihydroisoxazoles (Dafik and Khosla, 2011), cinnamoyl derivatives (Pardin et al., 2008a; Pardin et al., 2008b), oxindoles (Klock et al., 2011), sulfonamidopiperazines (Prime et al., 2012) are recent examples of such derivatives. The resolved TG2 structures co-crystallized either with irreversible inhibitors (Lindemann et al., 2012; Pinkas et al., 2007) or nucleotides (Han et al., 2010; Liu et al., 2002), revealed the huge conformational change of the enzyme when passing from the inactive to the active state, and will certainly enhance the design of more potent inhibitors in the future.

The present invention seeks to provide novel compounds which inhibit transglutaminase activity, for use in medicine.

SUMMARY OF THE INVENTION

This invention stems from the discovery that a new class of peptidomimetic derivatives, comprising a piperazine scaffold, are capable of interacting with transglutaminase enzymes, such as tissue transglutaminase, and inhibiting their activity.

According to a first aspect of the invention, there is provided a compound according to Formula I

wherein

R₁ is selected from the group consisting of R₄C(O)—, R₅OC(O)— and R₆S(O)₂— (wherein ‘-’ denotes the bond between the R₁ substituent group and the nitrogen of the piperazine ring)

-   -   wherein     -   R₄ is a lower alkyl group     -   R₅ and R₆ are selected from the group consisting of heterocyclic         groups, aralkyl groups and lower alkyl groups

R₂ is a side chain of an amino acid; and

R₃ is selected from the group consisting of —C(O)R₇ and —S(O)₂CHCH₂ (wherein ‘-’ denotes the bond between the R₃ substituent group and the nitrogen of the amino acid moiety within the compound of the invention)

-   -   -   wherein         -   R₇ is selected from the group consisting of alkyl halide,             alkylene dialkyl sulfonium, alkylenethioimidazolium, lower             alkyl, lower alkenyl, epoxide and alkylene dihydroisoxazole             groups             and pharmaceutically and/or veterinarily acceptable             derivatives thereof.

The compounds of the invention are inhibitors of transglutaminase enzymes, of which eight are currently known (TG1-7 and factor XIII). Thus, by “transglutaminase” we include enzymes as defined in accordance with Enzyme Commission System of Classification 2.3.2.1 3.

In a preferred embodiment, the transglutaminase enzyme is tissue transglutaminase. In an alternative embodiment, the transglutaminase enzyme may be factor XIII. The transglutaminase enzyme, e.g. tissue transglutaminase, is preferably human.

By “transglutaminase inhibitor” we include any compound that inhibits, in part or in whole, the transamidating activity of a transglutaminase enzyme (preferably in vivo).

In one embodiment, the compounds of the invention are irreversible inhibitors of tissue transglutaminase.

In one embodiment, the compounds of the invention are selective inhibitors of tissue transglutaminase. By “selective”, we mean that the compound inhibits tissue transglutaminase (preferably human TG2) to a greater extent than it inhibits other transglutaminase enzymes, such as Factor XIII, TG1 and TG3. Advantageously, the compound exhibits an IC50 for tissue transglutaminase (preferably human TG2) which is at least one order of magnitude lower than its IC50 for other transglutaminase enzymes, such as Factor XIII, TG1 and TG3 (see Example 2).

The term “lower alkyl” is intended to include linear or branched, cyclic or acyclic, C₁-C₂₀ alkyl, which is saturated. Lower alkyl groups which R₂, R₃, R₄, R₅ and/or R₆ may include C₁-C₁₀ alkyl, C₁-C₅ alkyl, C₁-C₄ alkyl, C₁-C₃ alkyl, C₁-C₂ alkyl, C₂-C₅ alkyl, C₃-C₅ alkyl, C₄-C₅ alkyl, C₂-C₄ alkyl, C₂-C₃ alkyl and C₃-C₄ alkyl. Preferred lower alkyl groups which R_(2,) R_(3,) R₄, R₅ and/or R₆ may represent include C₁, C₂, C₃, C₄ and C₅ alkyl.

It will be appreciated that the term “lower alkyl” encompasses cycloalkyl groups, for example C₆-C₂₀ cycloalkyl (carbocyclic) groups, including single and multiple (fused) rings, as well as planar and non-planar ring structures.

In one embodiment, the “lower alkyl” group is a C₆-C₁₀ cycloalkyl group.

The term “alkylene” is to be construed accordingly.

The term ‘lower alkyl halide’ is also to be construed accordingly.

The term “lower alkenyl” is intended to include linear or branched, cyclic or acyclic, C₂-C₂₀ alkenyl.

The term “lower alkenyl” also includes both the cis and trans geometric isomers. Lower alkenyl groups which R₃ may represent include C₂-C₁₀ alkenyl, C₂-C₉ alkenyl, C₂-C₈ alkenyl, C₂-C₇ alkenyl, C₂-C₆ alkenyl, C₂-C₅ alkenyl, C₂-C₄ alkenyl, C₂-C₃ alkenyl and C₃-C₄ alkenyl. Preferred lower alkenyl groups which R₃ may represent include C₂, C₃, C₄ and C₅ alkenyl.

In the compounds of the invention, R₁ is selected from the group consisting of R₄C(O)—, R₅OC(O)— and R₆S(O)₂— (wherein ‘-’ represents the bond to the nitrogen of the piperazine ring to which R₁ is attached), wherein R₄ is a lower alkyl group and R₅ and R₆ are selected from the group consisting of heterocyclic groups, aralkyl groups and lower alkyl groups.

Thus, in one embodiment, R₁ is R₄C(O)—.

In one embodiment, R₄ is a cycloalkyl group (such as a planar or fused ring comprising six to twenty carbons).

For example, R₄ may be an adamantyl substituent group of the following structure:

(wherein the dashed line represents the bond to the carbon of the carbonyl group of the compound of Formula I to which R₄ is attached).

In an alternative embodiment, R₁ is R₅OC(O)—, wherein R₅ is a heterocyclic group, aralkyl group or lower alkyl group.

By “heterocyclic” we include carbon ring structures comprising at least one non-carbon atom, such as nitrogen or oxygen. In one embodiment, the heterocyclic group is a single or multi-ring structure (planar or non-planar) comprising four to nine carbon atoms together with at least one nitrogen atom (such as a quinolyl ring).

By “aralkyl” we include aryl groups joined to the piperazine ring of the compound of the invention via a saturated, acyclic lower alkylene group. The term “aryl” includes six to ten-membered carbocyclic aromatic groups, such as phenyl and naphthyl, which groups are optionally substituted by one or more substituents selected from fluoro, cyano, nitro, lower alkyl (i.e. alkaryl), OR, C(O)R, C(O)OR, C(O)NRR′ and NRR′ (were R and R′ represent lower alkyl groups).

Thus, R₅ may comprise or consist of a phenyl or naphthyl group linked to the ester moiety of R₅OC(O)— by a straight chain C₁₋₆ alkylene group (such as a methylene or ethylene group).

In one embodiment, the phenyl or naphthyl group is substituted with one or more ester substituent groups of formula R₈OOC—, wherein R₈ is a lower alkyl group (such as a methyl, ethyl, propyl or butyl group),

For example, R₅ may be selected from the group consisting of

(wherein the dashed line represents the bond to the carbon of the carbonyl group of the compound of Formula I to which R₁ is attached).

In a further embodiment, R₅ is a lower alkyl group, which may be linear or branched, cyclic or acyclic.

Thus, R₅ may be —CR₉(R₁₀)(R₁₁), wherein R₉, R₁₀ and R₁₁ are each independently methyl or ethyl groups.

For example, R₁ may be:

(wherein the dashed line represents the bond to the carbon of the carbonyl group of the compound of Formula I to which R₁ is attached).

In a further embodiment, R₅ comprises a cycloalkyl group, such as an adamantyl ring.

For example, R₅ may be:

(wherein the dashed line represents the bond to the carbon of the carbonyl group of the compound of Formula I to which R₅ is attached).

In a further embodiment, R₁ is R₆S(O)₂—, wherein R₆ is a heterocyclic group, aralkyl group or lower alkyl group.

For example, R₆ may be a heterocyclic group, an aralkyl group or a lower alkyl group (as disclosed above in relation to R₅).

In one embodiment, R₆ comprises or consists of a cycloalkyl group, such as a phenyl or naphthyl group.

Thus, one embodiment, R₁ may be a dansyl group, such as

(wherein the dashed line represents the bond to the nitrogen atom of the piperazine of the compound of Formula I to which R₁ is attached).

The compounds of the invention comprise a central amino acid moiety, of which R₂ constitutes the amino acid side chain.

Thus, R₂ may be a side chain of a naturally-occurring, proteinogenic amino acid, for example selected from the group consisting of alanine, arginine, asparagine, aspartic acid, cysteine, glutamic acid, glutamine, glycine, histidine, isoleucine, leucine, lysine, methionine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine and valine.

However, in one embodiment, R₂ is not aromatic. For example, in one embodiment, R₂ is not the side chain of phenylalanine and/or tyrosine.

It will be appreciated that the carbon to which R₂ is attached may exhibit stereoisomerism. For example, this portion of the compound may correspond to an L-amino acid (such as L-alanine). Alternatively, this portion of the compound may correspond to a D-amino acid (such as D-alanine).

In one embodiment, R₂ is selected from the group consisting of hydrogen (i.e. the ‘side chain’ of glycine) and alkyl groups (i.e. the side chains of alanine, isoleucine, leucine and valine). For example, R₂ may be a methyl group (i.e. the amino acid core is alanine).

R₃ is a substituent group attached to the amino acid core of the compound of the invention via the nitrogen of the amino acid moiety thereof.

R₃ is selected from the group consisting of —C(O)R₇ and —S(O)₂CHCH₂, wherein

-   -   R₇ is selected from the group consisting of alkyl halide,         alkylene dialkyl sulfonium, alkylenethioimidazolium, lower         alkyl, lower alkenyl, epoxide and alkylene dihydroisoxazole         groups

Thus, in one embodiment, R₃ is —C(O)R₇.

In one embodiment, R₇ is a lower alkyl halide group.

By “halide”, we include fluoride (F⁻), chloride (Cl⁻), bromide (Br⁻) and iodide (I⁻).

Thus, the lower alkyl may be linear or branched C₁-C₅ alkyl and the halide may be bromide or chloride.

For example, R₇ may be

(wherein the dashed line represents the bond to the carbon of the carbonyl group to which R₇ is attached).

In an alternative embodiment, R₇ is an alkylene dialkyl sulfonium group, wherein the alkylene and alkyl groups are lower alkylene and alkyl, respectively (such as linear or branched C₁-C₅ alkylene or alkyl)

For example, R₇ may be

(wherein the dashed line represents the bond to the carbon of the carbonyl group to which R₇ is attached).

In a further alternative embodiment, R₇ is an alkylenethioimidazolium group, which may be substituted with one or more lower alkyl groups (such as linear or branched C₁-C₅ alkyl).

For example, R₇ may be

(wherein the dashed line represents the bond to the carbon of the carbonyl group to which R₇ is attached).

In a further alternative embodiment, R₇ is a lower alkyl group.

For example, R₃ may be —CH₃ (wherein ‘-’ represents the bond to the carbon of the carbonyl group to which R₇ is attached).

In a further alternative embodiment, R₇ is a lower alkenyl group.

For example, R₇ may be

(wherein the dashed line represents the bond to the carbon of the carbonyl group to which R₇ is attached).

In a further alternative embodiment, R₇ is an epoxide group.

In a further alternative embodiment, R₇ is an alkylene 3-halo-4,5-dihydroisoxazole group (e.g. a methylene 3-bromo-4,5-dihydroisoxazole group).

In a further alternative embodiment, R₃ is —S(O)₂CHCH₂ (wherein ‘-’ represents the bond to the nitrogen of the compound of the invention to which R₃ is attached).

Thus, R₃ forms a vinyl sulfonamide group (together with the —NH— moiety of the compound of the invention to which it is attached).

It will be appreciated that the various compounds of the invention may inhibit a transglutaminase enzyme with different potency.

In a preferred embodiment, the compound exhibits an IC50 for human tissue transglutaminase of less than 100 μM, for example less than 50 μM, 40 μM, 30 μM, 20 μM, 10 μM, 5 μM, 4 μM, 3 μM, 2 μM or less than 1 μM (see Example 2 for methodology).

Exemplary compounds of the invention are shown in Tables 1 to 3 (see Example 2 below).

However, in one embodiment, the compound is not EB 1-34, EB 1-45, EB 1-104, EB 1-105, EB 1-127, EB 1-131, EB 1-126 or EB 1-130.

It will be appreciated by persons skilled in the art that pharmaceutically, and/or veterinarily, acceptable derivatives of the compounds of Formula I, such as salts and solvates, are also included within the scope of the invention. Salts which may be mentioned include: acid addition salts, for example, salts formed with inorganic acids such as hydrochloric, hydrobromic, sulfuric and phosphoric acid, with carboxylic acids or with organo-sulfonic acids; base addition salts; metal salts formed with bases, for example, the sodium and potassium salts.

Thus, the compounds of formula I may be counterbalanced by counter-anions. Exemplary counter-anions include, but are not limited to, halides (e.g. fluoride, chloride and bromide), sulfates (e.g. decylsulfate), nitrates, perchlorates, sulfonates (e.g. methane-sulfonate) and trifluoroacetate. Other suitable counter-anions will be well known to persons skilled in the art.

In one embodiment, the compound is a bromide salt.

It will be further appreciated by skilled persons that the compounds of Formula I may exhibit tautomerism. All tautomeric forms and mixtures thereof are included within the scope of the invention.

Compounds of Formula I may also contain one or more asymmetric carbon atoms and may therefore exhibit optical and/or diastereoisomerism. Diastereoisomers may be separated using conventional techniques, e.g. chromatography or fractional crystallisation. The various stereoisomers may be isolated by separation of a racemic or other mixture of the compounds using conventional, e.g. fractional crystallisation or HPLC techniques. Alternatively the desired optical isomers may be made by reaction of the appropriate optically active starting materials under conditions which will not cause racemisation or epimerisation, or by derivatisation, for example with a homochiral acid followed by separation of the diastereomeric esters by conventional means (e.g. HPLC, chromatography over silica). All stereoisomers are included within the scope of the invention.

A second aspect of the invention provides a pharmaceutical formulation comprising a compound according to the first aspect of the invention and a pharmaceutically acceptable excipient, carrier or diluent.

The compounds may be formulated at various concentrations, depending on the efficacy of the particular compound being used. Preferably, the composition comprises the compound at a concentration of between 1 nM and 1 M, for example between 0.1 μM and 1 mM, 1 μM and 100 μM, between 5 μM and 50 μM, between 10 μM and 50 μM, between 20 μM and 40 μM and optionally about 30 μM. For ex vivo and in vitro applications, compositions may comprise a lower concentration of a modified osteopontin polypeptide, for example between 0.0025 μM and 1 μM.

The excipient, carrier or diluent will be selected with regard to the intended route of administration and standard pharmaceutical practice (for example, see Remington: The Science and Practice of Pharmacy, 19^(th) edition, 1995, Ed. Alfonso Gennaro, Mack Publishing Company, Pennsylvania, USA, which is incorporated herein by reference).

By “pharmaceutically acceptable” is included that the excipient, carrier or diluent is non-toxic, sterile and pyrogen free.

Suitable pharmaceutical carriers are well known in the art of pharmacy. The carrier(s) must be “acceptable” in the sense of being compatible with the compound of the invention and not deleterious to the recipients thereof. Typically, the carriers will be water or saline which will be sterile and pyrogen free; however, other acceptable carriers may be used. Thus, “pharmaceutically acceptable carrier” and “pharmaceutically acceptable excipient” includes any compound(s) used in forming a part of the formulation that is intended to act merely as a carrier, i.e., not intended to have biological activity itself. The pharmaceutically acceptable carrier or excipient is generally safe, non-toxic, and neither biologically nor otherwise undesirable. A pharmaceutically acceptable carrier or excipient as used herein includes both one and more than one such carrier or excipient.

The excipient may be one or more of carbohydrates, polymers, lipids and minerals. Examples of carbohydrates include lactose, sucrose, mannitol, and cyclodextrines, which are added to the composition, e.g. for facilitating lyophilisation. Examples of polymers are starch, cellulose ethers, cellulose carboxymethylcellulose, hydroxypropylmethyl cellulose, hydroxyethyl cellulose, ethylhydroxyethyl cellulose, alginates, carageenans, hyaluronic acid and derivatives thereof, polyacrylic acid, polysulphonate, polyethylene-glycol/polyethylene oxide, polyethyleneoxide/polypropylene oxide copolymers, polyvinyl-lalcohol/polyvinylacetate of different degree of hydrolysis, and polyvinylpyrrolidone, all of different molecular weight, which are added to the composition, e.g., for viscosity control, for achieving bioadhesion, or for protecting the lipid from chemical and proteolytic degradation. Examples of lipids are fatty acids, phospholipids, mono-, di-, and triglycerides, ceramides, sphingolipids and glycolipids, all of different acyl chain length and saturation, egg lecithin, soy lecithin, hydrogenated egg and soy lecithin, which are added to the composition for reasons similar to those for polymers. Examples of minerals are talc, magnesium oxide, zinc oxide and titanium oxide, which are added to the composition to obtain benefits such as reduction of liquid accumulation or advantageous pigment properties.

The term “diluent” is intended to mean an aqueous or non-aqueous solution with the purpose of diluting the peptide in the pharmaceutical preparation. The diluent may be one or more of saline, water, polyethylene glycol, propylene glycol, ethanol or oils (such as safflower oil, corn oil, peanut oil, cottonseed oil or sesame oil).

The diluent may also function as a buffer. The term “buffer” is intended to mean an aqueous solution containing an acid-base mixture with the purpose of stabilising pH. Examples of buffers are Trizma, Bicine, Tricine, MOPS, MOPSO, MOBS, Tris, Hepes, HEPBS, MES, phosphate, carbonate, acetate, citrate, glycolate, lactate, borate, ACES, ADA, tartrate, AMP, AMPD, AMPSO, BES, CABS, cacodylate, CHES, DIPSO, EPPS, ethanolamine, glycine, HEPPSO, imidazole, imidazolelactic acid, PIPES, SSC, SSPE, POPSO, TAPS, TABS, TAPSO and TES.

The formulations according to the second aspect of the invention may conveniently be presented in unit dosage form and may be prepared by any of the methods well known in the art of pharmacy. Such methods include the step of bringing into association the active ingredient (i.e. a compound according to the first aspect of the invention) with the carrier which constitutes one or more accessory ingredients. In general, the formulations are prepared by uniformly and intimately bringing into association the active ingredient with liquid carriers or finely divided solid carriers or both, and then, if necessary, shaping the product.

Formulations in accordance with the present invention suitable for oral administration may be presented as discrete units such as capsules, cachets or tablets, each containing a predetermined amount of the active ingredient; as a powder or granules; as a solution or a suspension in an aqueous liquid or a non-aqueous liquid; or as an oil-in-water liquid emulsion or a water-in-oil liquid emulsion. The active ingredient may also be presented as a bolus, electuary or paste. It will be appreciated by those skilled in the art that the compounds for oral administration should preferably be formulated so as to be protected in the gut and to permit bioadsorption.

Preferred unit dosage formulations are those containing a daily dose or unit, daily sub-dose or an appropriate fraction thereof, of an active ingredient.

Formulations suitable for parenteral administration include aqueous and non-aqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats and solutes which render the formulation isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents. The formulations may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilised) condition requiring only the addition of the sterile liquid carrier, for example water for injections, immediately prior to use. Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets of the kind previously described.

For treatment of diseases and conditions of the eye, the compound may be formulated in accordance with routine procedures as a pharmaceutical composition adapted for application to the eye. Thus, the pharmaceutical composition may be for topical ophthalmic use, for example aqueous eye drops, oily eye drops, eye ointments, eye lotions, ocuserts, hydrogel contact lenses, collagen shields and ophthalmic rods.

Topical compositions for the eye will typically have a pH in the range of 4.5 to 8.0. The ophthalmic compositions must also be formulated to have osmotic values that are compatible with the aqueous humor of the eye and ophthalmic tissues. Such osmotic values will generally be in the range of from about 200 to about 400 milliosmoles per kilogram of water (“mOsm/kg”), but will preferably be about 300 mOsm/kg.

In yet another embodiment, the TGase inhibitor compounds as described herein can be delivered in a controlled release system. For example, a pump may be used (see Langer, supra; Sefton, CRC Crit. Ref. Biomed. Eng. 14:201 (1987); Buchwald et al., Surgery 88:507 (1980); Saudek et al., N. Engl. J. Med. 321:574 (1989); the disclosures of which are incorporated by reference).

In another embodiment, polymeric materials can be used (see Medical Applications of Controlled Release, Langer and Wise (eds.), CRC Pres., Boca Raton, Fla. (1974); Controlled Drug Bioavailability, Drug Product Design and Performance, Smolen and Ball (eds.), Wiley, New York (1984); Ranger and Peppas, J., Macromol. Sci. Rev. Macromol. Chem. 23:61 (1983); see also Levy et al., Science 228:190 (1985); During et al., Ann. Neurol. 25:351 (1989); Howard et al., J. Neurosurg. 71:105 (1989); the disclosures of which are incorporated by reference).

It will be appreciated by persons skilled in the art that the compounds of the invention may comprise one or more additional active agents, such as anti-inflammatory agents, local anaesthetics and anti-biotic agents.

A third aspect of the invention provides a method of making a compound according to the first aspect of the invention comprising the following steps:

-   -   (a) synthesis of a p-nitrophenylcarbonate;     -   (b) piperazine alkylation of the p-nitrophenylcarbonate to         produce a piperazine carboxylate;     -   (c) peptide coupling of the piperazine carboxylate; and     -   (d) carbamate deprotection of the product of step (c).

In one embodiment, the method further comprises step (e) of acrylamide derivatisation of the product of step (d).

In an alternative embodiment, the method further comprises step (e) of acetylation of the product of step (d).

In an alternative embodiment, the method further comprises step (e) of producing a dialkylsulfonium salt of the product of step (d).

In an alternative embodiment, the method further comprises step (e) of producing a vinyl sulfonamide of the product of step (d).

Further details of suitable synthesis routes for producing the compounds of the invention are provided in Example 1.

A fourth aspect of the invention provides a compound according to the first aspect of the invention for use in medicine.

A fifth aspect of the invention provides a compound according to the first aspect of the invention for use in the treatment or prevention of a disease or condition which is responsive to treatment with a transglutaminase inhibitor.

For example, the disease or condition may be responsive to treatment with an inhibitor of tissue transglutaminase (TG2).

In one embodiment, the disease or condition is responsive to treatment with an angiogenesis inhibitor. Thus, the compounds of the invention may be used to inhibit angiogenesis, especially pathological angiogenesis (i.e. the formulation of new vasculature associated with a disease or disorder; see Chung & Ferrera, 2011, Ann. Rev. Cell Dev. Biol. 27:563-584, the disclosures of which are incorporated by reference).

By “inhibiting angiogenesis” we mean that administration of the compound is capable of reducing, at least in part, the formation of new blood vessels in vivo. Thus, the compound may inhibit angiogenesis in vivo by at least 10% compared to the level of angiogenesis in the absence of the compound, for example by at least 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or more. It will be appreciated that inhibition may require repeated (i.e. chronic) administration of the compound.

In a further embodiment, the disease or condition is selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).

For example, the disease or condition may be a fibrosis (such as cystic fibrosis).

Alternatively, the disease or condition may be a neurodegenerative disease (such as Alzheimer's disease, Huntington's disease or Parkinson's disease),

In a further alternative embodiment, the disease or condition is an autoimmune disease (such as multiple sclerosis or coeliac disease).

In one embodiment, the disease or condition is associated with pathological angiogenesis. By “disease or disorder associated with pathological angiogenesis”, we mean a disease or disorder in which abnormal or otherwise undesirable angiogenesis occurs, such that partial or complete inhibition of angiogenesis provides a beneficial effect to the patient (e.g. alleviates one or more symptoms and/or slows or prevents progression of the disease or disorder).

For example, the disease or condition may be selected from the group consisting of hemangiomas, psoriasis, Kaposi's sarcoma, ocular neovascularisation, rheumatoid arthritis, endometriosis, atherosclerosis and tumour growth and metastasis.

In one embodiment, the disease or condition may be a cancer.

For example, the cancer may be associated with solid tumours (such as prostate cancer, breast cancer, lung cancer, colorectal cancer, melanomas, bladder cancer, brain/CNS cancer, cervical cancer, oesophageal cancer, gastric cancer, head/neck cancer, kidney cancer, liver cancer, lymphomas, ovarian cancer, pancreatic cancer, and sarcomas).

In a further embodiment, the disease or condition is of the eye, such as a disease or disorder of the retina and/or choroid.

Thus, the disease or condition may be a retinopathy.

For example, the disease or condition may be selected from the group consisting of diabetic retinopathy, age-related macular degeneration, retinopathy of prematurity, central retinal vein occlusion, sickle cell retinopathy, branch and central retinal vein occlusion and retinal trauma.

Alternatively, the disease or condition may be selected from the group consisting of chronic inflammation or infection (e.g. HSV infection of the ocular surface resulting in blood vessel formation), corneal scarring, wound repair, pterygium and neovascular glaucoma (i.e. growth of blood vessels on iris and into anterior chamber angle; robeosis iridis).

In a further embodiment, the disease or condition may be responsive to treatment with an inhibitor of factor XIII. For example, the disease or condition may be associated with the formation of fibrin clots.

A related, fifth aspect of the invention provides the use of a compound according to the first aspect of the invention in the preparation of a medicament for the treatment or prevention of a disease or condition which is responsive to treatment with an inhibitor of a transglutaminase (such as tissue transglutaminase or factor XIII).

Suitable diseases and conditions for which the compounds may be used are identified above in relation to the fourth aspect of the invention.

For example, the disease or condition may be selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).

A related, sixth aspect of the invention provides a method of treating a subject in need of treatment with a transglutaminase inhibitor comprising administering to said subject a compound according to the first aspect of the invention or a pharmaceutical formulation according to the second aspect of the invention.

It will be appreciated that the compound should be administered in a therapeutically effective amount to inhibit transglutaminase activity (at least in part). A ‘therapeutically effective amount’, or ‘effective amount’, or ‘therapeutically effective’, as used herein, refers to that amount which provides a therapeutic effect for a given condition and administration regimen (via an inhibition of transglutaminase activity). This is a predetermined quantity of the compound of the invention calculated to produce a desired therapeutic effect in association with the required additive and diluent, i.e. a carrier or administration vehicle. Further, it is intended to mean an amount sufficient to reduce and most preferably prevent, a clinically significant deficit in the activity, function and response of the subject. Alternatively, a therapeutically effective amount is sufficient to cause an improvement in a clinically significant condition in a subject. As is appreciated by those skilled in the art, the amount of a compound may vary depending on its specific activity. Suitable dosage amounts may contain a predetermined quantity of active composition calculated to produce the desired therapeutic effect in association with the required diluent. In the methods and use for manufacture of compositions of the invention, a therapeutically effective amount of the active component is provided. A therapeutically effective amount can be determined by the ordinary skilled medical or veterinary worker based on patient characteristics, such as age, weight, sex, condition, complications, other diseases, etc., as is well known in the art.

Suitable diseases and conditions for which the compounds may be used are identified above in relation to the fourth aspect of the invention.

Preferably, the compound according to the first aspect of the invention or a pharmaceutical formulation according to the second aspect of the invention is administered in an amount sufficient to inhibit, at least in part, tTGase-mediated protein modification (i.e. cross-linking). More preferably, the compound or formulation is administered in an amount sufficient to inhibit tTGase-mediated protein cross-linking by at least 10%, for example, at least 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or 95%. Most preferably, the compound or formulation is administered in an amount sufficient to inhibit completely tTGase-mediated protein cross-linking.

TGase-mediated protein modification may be measured by methods known in the art. For example, detection of the isodipeptide E(y-glutamyl)lysine in body fluids can be used as an indirect measure of the frequency of crosslinking in diseases which involve this protein cross link. Hence, a reduction of the isodipeptide in the body fluid provides an indirect measure of reduced protein crosslinking (see Nemes et aL, 2002, Minerva Biotechnology 14, 183).

Alternatively, a tissue biopsy may be taken and analysed, for example by ion exchange or reversed phase HPLC after proteolytic digestion of the material (Griffin & Wilson, 1984, Mol. Cell Biochem. 58:37-49), or by staining biopsy sections and analysing by immunohistochemistry (Skill et al., 2001, 81:705-716).

In a further embodiment, the compound or formulation is administered in an amount sufficient to inhibit, at least in part, angiogenesis.

For example, the subject may have or be at risk of developing a disease or condition selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).

It will be appreciated by those skilled in the art that treatment may be prophylactic and/or therapeutic. For example, the compounds and formulations of the invention may be used to slow and/or to prevent the onset of a disease/disorder in the subject being treated. Alternatively, or in addition, the compounds and formulations of the invention may be used to reduce or eradicate the symptoms of a disease/disorder in the subject being treated.

It will be further appreciated by those skilled in the art that the compound or formulation of the first and second aspects of the invention, respectively, may be administered by any route known or developed in the art. For example, the compound or formulation may be administered by parenteral injection (e.g. intravenous, subcutaneous or intramuscular), orally or topically.

In one embodiment, the compound or formulation is administered systemically, for example intravenously. Alternatively, the compound or formulation is administered topically, e.g. at or near a target site where TGase-mediated protein modification is to be inhibited.

Treatment with a compound or formulation according to the invention may consist of a single dose or a plurality of doses over a period of time. Advantageously, the compound or formulation is administered repeatedly.

Compounds and formulations of the invention may also be administered by a surgically implanted device that releases the compound or formulation directly to the required site, for example in the vicinity of a solid tumour.

It will be appreciated by persons skilled in the art that the compounds of the invention may be used for the treatment of any mammal. Preferably, the subject is human. Alternatively, the subject may be a dog, cat, horse, or other domestic or farm mammalian animal.

A further aspect of the invention provides a method for preventing or treating rejection of a transplanted organ comprising contacting the organ with a compound according to the first aspect of the invention or a formulation according to the second aspect of the invention. Thus, the invention provides the use of a compound according to the first aspect of the invention in the preparation of a medicament for preventing or treating rejection of a transplanted organ.

In one embodiment, the organ is a heart, lung, kidney or liver.

Thus, the organ may be a kidney. Kidneys that are to be transplanted often show some upregulation of tissue transglutaminase and possibly other transglutaminases. Moreover, kidneys which are rejected after transplantation often exhibit excessive scarring and upregulation of transglutaminase activity and crosslinking (Abo-Zenah et al., 2001, J. Am. Soc. Nephrol. 12, 4454A). Such tissue degeneration and subsequent organ rejection may be prevented by treating the kidney (or other organ) with a transglutaminase inhibitor.

It will be appreciated that the compound or formulation may be delivered before, during and/or after transplantation of the organ. Thus, in one embodiment, the organ is treated prior to transplantation, for example by perfusing and/or bathing with a solution containing a compound according to the first aspect of the invention.

In an alternative embodiment, the organ is treated during and/or after transplantation into a patient. Advantageously, the compound or formulation is delivered at or near the site of the transplant, for example by local administration.

Preferred, non-limiting examples which embody certain aspects of the invention will now be described with reference to the following figures.

FIG. 1 shows the effect of exemplary TGase inhibitor compounds of the invention on intracellular tissue transglutaminase (TG2) activity. Three of the test compounds comprised an acrylamide-based R₃ “warhead” group (1-155, 1-180 and 2-16) and three of the test compounds comprised a sulphonamide-based R₃ “warhead” group (1-159, 1-178 and 2-18).

EXAMPLES Example 1 Synthesis of Exemplary Compounds of the Invention

Analytical Methodology

The infrared (IR) spectra were recorded on a Thermo Scientific Nicolet iS5 FT-IR spectrometer equipped with an ID5 Diamond ATR accessory. Signal intensities were abbreviated as follows: weak (w), medium (m) and strong(s).

¹H NMR and ¹³C NMR were recorded with Bruker Avance DPX250 (at 250.131 MHz and 62.895 MHz, respectively) in CDCl₃ and DMSO, using tetramethylsilane (TMS) as an internal standard. Chemical shifts are reported in parts per million (ppm) and the coupling constants are reported in units of Hertz [Hz]. Multiplicities were abbreviated as follows: singlet (s), doublet (d), triplet (t), quartet (q), pentuplet (p), sextet (sx), septet (sp), apparent singlet (as), apparent doublet (ad), apparent triplet (at)

Low-resolution mass spectra (MS) were recorded with a Waters—LCT Premier. High resolution mass spectra (HRMS) were recorded with a Thermo Fischer Scientific LTQ Orbitrap XL at EPSRC National Mass Spectrometry Centre, Swansea (UK).

Melting points were recorded using a Reichert-Jung Thermo Galen—Hot Stage Microscope equipped with a Pt 100/RTD temperature sensor.

Flash chromatography was performed on Merck 40-70 nM (230-400 mesh) silica gel under nitrogen pressure. Thin-layer chromatography (TLC) was carried out on Merck silica gel 60 F254 precoated plates. Visualization was made with ultraviolet light (λ=254/365 nm) and, if necessary, using an ethanolic solution of potassium permanganate.

Overview of Synthesis Route

General Method for the Synthesis of the p-nitrophenyl-carbonates (A)

Under nitrogen atmosphere, N-methylmorpholine (1.6 eq.) was added to a solution of the corresponding alcohols (1 eq., 3 mmol) in DCM (20 ml). The mixture was cooled to 0° C. and subsequently a solution of p-nitrophenyl chloroformate (1.5 eq.) in DCM (5 ml) was added slowly, and the mixture was vigorously stirred at 0° C. until the complete consumption of the starting material (usually 1-2 h). The reaction mixture was diluted with DCM (75 ml) and subsequently washed with sodium bicarbonate (aqueous satd. soln., 3×100 ml). The recovered organic layer was dried over magnesium sulfate and the solvent evaporated under vacuum.

(a) methyl 4-[(4-nitrophenoxy)carbonyloxymethyl]benzoate (1b)

The crude product obtained following the general protocol was washed with methanol, then with diethyl ether and further dried under reduced pressure to remove traces of solvents. C₁₆H₁₃NO₇; yield 88%; white solid; m.p. 95-96° C.; M=331.28 g/mol; IR (ATR): v=1763 (s), 1706 (s), 1527 (s), 1448 (m), 1430 (m), 1281 (m), 1208 (m-s), 980 (m), 853 (m-s), 753 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.28 (d, J=9.2 Hz, 2H), 8.08 (d, J=8.3 Hz, 2H), 7.51 (d, J=8.3 Hz, 2H), 7.38 (d, J=9.2 Hz, 2H), 5.35 (s, 2H), 3.93 (s, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 166.7 (C_(q)), 155.5 (C_(q)), 152.5 (C_(q)), 145.6 (C_(q)), 139.2 (C_(q)), 130.8 (C_(q)), 130.2 (2CH), 128.2 (2CH), 125.5 (2CH), 121.9 (2CH), 70.2 (CH₂), 52.4 (CH₃); MS: m/z=354 [M+Na]⁺;

(b) 2-naphthylmethyl (4-nitrophenyl) carbonate (1c)

The crude product obtained following the general protocol was washed with methanol, then with diethyl ether and further dried under reduced pressure to remove traces of solvents. C₁₈H₁₃NO₅; yield 67%; white solid; m.p. 151-152° C.; M=323.30 g/mol; ; IR (ATR): v=1748 (s), 1524 (m), 1351 (m), 1263 (s), 1214 (s), 953 (m), 859 (m), 750 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.31-8.24 (m, 2H), 7.92-7.84 (m, 4H), 7.56-7.50 (m, 3H), 7.42-7.36 (m, 2H), 5.47 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 155.7 (C_(q)), 152.6 (C_(q)), 145.5 (C_(q)), 133.6 (C_(q)), 133.2 (C_(q)), 131.7 (C_(q)), 128.9 (CH), 128.3 (CH), 128.3 (CH), 127.9 (CH), 126.9 (CH), 126.7 (CH), 126.0 (CH), 125.4 (2CH), 121.9 (2CH), 71.3 (CH₂); MS: m/z=346 [M+Na]⁺;

(c) methyl 6((4-nitrophenoxy)carbonyloxymethylThaphthalene-2-carboxylate (1d)

The crude product obtained following the general protocol was used for the next steps without further purification. C₂₀H₁₅NO₇; white solid; yield 88%; M=381.34 g/mol; IR (ATR): v=1754 (s), 1715 (s), 1515 (s), 1384 (m), 1254 (m), 1208 (m-s), 853 (m-s), 750 (w) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.63 (s, 1H), 8.31-8.25 (m, 2H), 8.11 (dd, J=8.6 Hz, J=1.6 Hz, 1H), 8.01 (d, J=8.5 Hz, 1H), 7.95 (as, 1H), 7.91 (d, J=8.7 Hz, 1H), 7.60 (dd, J=8.4 Hz, J=1.7 Hz, 1H), 7.43-7.36 (m, 2H), 5.48 (s, 2H), 4.00 (s, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 155.6 (C_(q)), 152.6 (C_(q)), 145.6 (C_(q)), 135.4 (C_(q)), 134.3 (C_(q)), 132.6 (C_(q)), 131.0 (CH), 130.3 (CH), 128.5 (CH), 128.4 (C_(q)), 127.8 (CH), 126.6 (CH), 126.1 (CH), 125.5 (2CH), 121.9 (2CH), 70.9 (CH₂), 52.5 (CH₃); MS: m/z=404 [M+Na]⁺;

(d) 1-adamantylmethyl (4-nitrophenyl) carbonate (1f)

The crude product obtained following the general protocol was washed with methanol, then with diethyl ether and further dried under reduced pressure to remove traces of solvents. C₁₈H₂₁NO_(5;) yield 82%; white solid; m.p. 102-103° C.; M=331.36 g/mol; IR (ATR): v=2913 (m), 2847 (m), 1748 (s), 1518 (s), 1342 (m-s), 1266 (m-s), 1217 (s), 856 (m), 762 (w), 729 (w) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.31-8.25 (m, 2H), 7.42-7.36 (m, 2H), 3.89 (s, 2H), 2.03 (s, 3H), 1.79-1.70 (m, 6H), 1.61 (d, J=2.6 Hz, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 155.9 (C_(q)), 152.9 (C_(q)), 145.4 (C_(q)), 125.4 (2CH), 121.9 (2CH), 79.1 (CH₂), 39.0 (3CH₂), 36.9 (3CH₂), 33.5 (C_(q)), 28.0 (3CH); MS: m/z=354 [M+Na]⁺;

(e) 2-(1-adamantyl)ethyl(4-nitrophenyl) carbonate (1g)

The crude product obtained following the general protocol was washed with methanol, then with diethyl ether and further dried under reduced pressure to remove traces of solvents. C₁₉H₂₃NO₅; yield 81%; white solid; m.p. 94-95° C.; M=345.39 g/mol; IR (ATR): v=2898 (m), 2841 (w), 1757 (s), 1527 (s), 1342 (s), 1260 (s), 1205 (s), 950 (m), 856 (s), 668 (m) cm⁻¹;¹H NMR (250 MHz, CDCl₃) δ 8.31-8.35 (m, 2H), 7.41-7.34 (m, 2H), 4.35 (t, J=7.5 Hz, 2H), 1.98 (as, 3H), 1.75-1.62 (m, 6H), 1.59-1.53 (m, 8H); ¹³C NMR (63 MHz, CDCl₃) δ 155.7 (C_(q)), 152.6 (C_(q)), 145.4 (C_(q)), 125.4 (2CH), 121.9 (2CH), 66.4 (CH₂), 42.5 (3CH₂), 42.3 (CH₂), 37.0 (3CH₂), 31.8 (C_(q)), 28.6 (3CH); MS: m/z=368 [M+Na]⁺;

General Method for the piperazine alkylation step (B)

Under inert atmosphere and at 0° C., the previously obtained carbonate (1 eq., 1.5 mmol) was added to a solution of piperazine (2eq.) and TEA (5 eq.) in DMF (20 ml). The mixture was allowed to come back to room temperature and stirred vigorously overnight. After the complete consumption of the starting material, the mixture was diluted with ethyl acetate (100 ml) and washed with sodium chloride (aqueous satd. soln., 3×200 ml). The organic layer was dried over magnesium sulfate, filtered and the solvent evaporated under reduced pressure.

(a) (4-methoxycarbonylphenyl)methyl piperazine-1-carboxylate (2b)

The crude product obtained following the general protocol was further purified by flash chromatography (eluent: DCM/MeOH 9/1) to conduct to the final derivative. C₁₄H₁₈N₂O₄;

yield 64%; light yellow solid; m.p. 69-70° C.; M=278.30 g/mol; IR (ATR): v=3338 (w), 2950 (w), 1709 (s), 1687 (s), 1433 (s), 1423 (s), 1405 (s), 1275 (s), 1226 (s), 1129 (s), 1105 (s), 798 (m), 762 (s), 750 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.03 (d, J=8.3 Hz, 2H), 7.41 (d, J=8.1 Hz, 2H), 5.18 (s, 2H), 3.91 (s, 3H), 3.49 (t, J=5.1 Hz, 4H), 2.84 (t, J=4.7 Hz, 4H), 1.86 (s, 1H); ¹³C NMR (63 MHz, CDCl₃) δ 166.9 (C_(q)), 155.2 (C_(q)), 142.0 (C_(q)), 130.0 (2CH), 129.9 (C_(q)), 127.5 (2CH), 66.5 (CH₂), 52.3 (CH₃), 45.9 (2CH₂), 45.1 (2CH₂); MS: m/z=279 [M+]⁺;

(b) 2-naphthylmethyl piperazine-1-carboxylate (2c)

The crude product obtained following the general protocol was further purified by flash chromatography (eluent: DCM/MeOH 9/1) to conduct to the final derivative. C₁₆H₁₈N₂O₂; yield 92%; white solid; m.p. 44-45° C.; M=270.33 g/mol; IR (ATR): v=3259 (w), 2913 (w), 1681 (s), 1442 (m), 1417 (m), 1229 (s), 1129 (m), 1111 (m), 1084 (m), 744 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.85-7.81 (m, 4H), 7.51-7.44 (m, 3H), 5.29 (s, 2H), 3.49 (t, J=5.1 Hz, 4H), 2.82 (as, 4H), 2.25 (s, 1H); ¹³C NMR (63 MHz, CDCl₃) δ 155.4 (C_(q)), 134.2 (C_(q)), 133.3 (C_(q)), 133.2 (C_(q)), 128.4 (CH), 128.1 (CH), 127.8 (CH), 127.1 (CH), 126.3 (CH), 126.3 (CH), 125.9 (CH), 67.7 (CH₂), 45.8 (2CH₂), 44.8 (2CH₂); MS: m/z=271 [M+H]⁺;

(c) (6-methoxycarbonyl-2-naphthyl)methyl piperazine-1-carboxylate (2d)

The crude product obtained following the general protocol was further purified by flash chromatography (eluent: DCM/MeOH 9/1) to conduct to the final derivative. C₁₈H₂₀N₂O₄; yield 85%; white solid; m.p. 94-95° C.; M=328.36 g/mol; IR (ATR): v=3320 (w), 2950 (w), 1712 (m), 1681 (s), 1433 (m), 1287 (m), 1226 (m), 1193 (m), 1120 (m), 1075 (m), 756 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.60 (s, 1H), 8.07 (dd, J=8.6 Hz, J=1.7 Hz, 1H), 7.95 (d, J=8.5 Hz, 1H), 7.88 (d, J=8.7 Hz, 1H), 7.84 (s, 1H), 7.53 (dd, J=8.5 Hz, J=1.6 Hz, 1H), 5.31 (s, 2H), 3.98 (s, 3H), 3.51 (t, J=5.1 Hz, 4H), 2.85 (at, J=4.6 Hz, 4H); ¹³C NMR (63 MHz, CDCl₃) δ 167.3 (C_(q)), 155.3 (C_(q)), 137.0 (C_(q)), 135.5 (C_(q)), 132.3 (C_(q)), 130.9 (CH), 129.9 (CH), 128.4 (CH), 127.8 (C_(q)), 126.6 (CH), 126.5 (CH), 125.8 (CH), 67.1 (CH₂), 52.4 (CH₃), 46.0 (2CH₂), 45.1 (2CH₂); MS: m/z=329 [M+H]⁺and 351 [M+Na]⁺;

(d) 1-adamantylmethyl piperazine-1-carboxylate (2f)

The crude product obtained following the general protocol was subsequently used without further purification. C₁₆H₂₆N₂O₂; yield 62%; light yellow solid; M=278.39 g/mol; IR (ATR): v=2883 (m-s), 2841 (m), 1678 (s), 1427 (s), 1232 (s), 1120 (m), 765 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 3.66 (s, 2H), 3.44 (t, J=5.1 Hz, 4H), 2.82 (t, J=5.1 Hz, 4H), 2.13 (s, 1H), 1.96 (as, 3H), 1.73-1.60 (m, 6H), 1.51 (d, J=2.5 Hz, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 155.9 (C_(q)), 75.2 (CH₂), 46.0 (2CH₂), 44.9 (2CH₂), 39.5 (3CH₂), 37.1 (3CH₂), 33.6 (C_(q)), 28.2 (3CH); MS: m/z=279 [M+H]⁺;

(e) 2-(1-adamantyl)ethyl piperazine-1-carboxylate (2g)

The crude product obtained following the general protocol was further purified by flash chromatography (eluent: DCM/MeOH 95/5) to conduct to the final derivative. C₁₇H₂₈N₂O₂; yield 77%; light yellow oil becoming a light yellow solid on standing; m.p. 56-57° C.; M=292.42 g/mol; IR (ATR): v=2895 (s), 2837 (m), 1687 (s), 1436 (s), 1232 (s), 1120 (s), 1087 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 4.12 (t, J=7.3 Hz, 2H), 3.42 (t, J=5.0 Hz, 4H), 2.81 (t, J=5.0 Hz, 4H), 1.93 (as, 3H), 1.71-1.58 (m, 6H), 1.52-1.51 (m, 6H), 1.41 (t, J=7.3 Hz, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 155.8 (C_(q)), 61.9 (CH₂), 46.0 (2CH₂), 44.9 (2CH₂), 43.0 (CH₂), 42.7 (3CH₂), 37.2 (3CH₂), 31.9 (C_(q)), 28.7 (3CH); MS: m/z=293 [M+H]⁺;

(f) tert-butyl N-[2-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]-2-oxo-ethyl]-carbamate (2 h)

The coupling compound was obtained following the general protocol described before. The crude product was purified by flash-chromatography (DCM/MeOH 98/2) to give the titled derivative. C₂₃H₃₂N₄O₅S; yield 89%; light yellow solid; m.p. 176-177° C.; M=476.59 g/mol; IR (ATR): v=3287 (w), 2977 (w), 1703 (m), 1642 (s), 1339 (m), 1232 (m), 1160 (s), 1141 (s), 932 (m), 798 (s), 710 (m), 616 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.58 (d, J=8.5 Hz, 1H), 8.35 (d, J=8.7 Hz, 1H), 8.19 (dd, J=7.4 Hz, J=1.3 Hz, 1H), 7.54 (dd, J=8.6 Hz, J=7.5 Hz, 2H), 7.19 (d, J=7.0 Hz, 1H), 5.36 (as, 1H), 3.86 (d, J=4.5 Hz, 2H), 3.67-3.63 (m, 2H), 3.44-3.40 (m, 2H), 3.19-3.15 (m, 4H), 2.88 (s, 6H), 1.40 (s, 9H);¹³C NMR (63 MHz, CDCl₃) δ 167.0 (C_(q)), 155.8 (C_(q)), 152.0 (C_(q)), 132.2 (C_(q)), 131.3 (CH), 131.0 (CH), 130.4 (C_(q)), 130.2 (C_(q)), 128.5 (CH), 123.3 (CH), 119.4 (CH), 115.5 (CH), 79.9 (C_(q)), 45.6 (CH₂), 45.5 (2CH₃), 45.4 (CH₂), 44.2 (CH₂), 42.2 (CH₂), 41.6 (CH₂), 28.4 (3CH₃); MS: m/z=499 [M+Na]⁺;

General Method for the Peptide Coupling Step (C)

Under inert atmosphere and at room temperature, to a solution of the previously obtained piperazine (1.85 mmol, 1 eq.) in dichloromethane (DCM, 15 ml) were successively added: N-(3-Dimethylaminopropyl)-N′-ethylcarbodiimide (EDC, 1.85 mmol, 1 eq.), 1-hydroxybenzotriazole (0.37 mmol, 0.2 eq.), the corresponding Boc-protected aminoacid (1.85 mmol, 1 eq.) and N-methylmorpholine (5.55 mmol, 3 eq.). After 12 hours of stirring, the reaction mixture was diluted by addition of 75 ml of DCM and washed with citric acid (aq soln. 10%, 3×50 ml) and then with brine. The organic phase was subsequently dried over magnesium sulfate, filtered and the solvent evaporated under vacuum. The crude product was purified by flash-chromatography to give the desired coupling product.

(a) benzyl 4-[(2-(tert-butoxycarbonylamino)acetyl]piperazine-1-carboxylate (3a)

The crude derivative obtained following the general protocol described before was purified by flash-chromatography (eluent: EtOAc/PE 5/5). C₁₉H₂₇N₃O₅; yield 95%; white solid; m.p. 66-67° C.; M=377.43 g/mol; IR (ATR): v=3329 (w), 2971 (w), 1691 (s), 1627 (m), 1527 (m), 1420 (m), 1223 (s), 1153 (m), 756 (m), 695 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.40-7.32 (m, 5H), 5.48 (as, 1H), 5.14 (s, 2H), 3.96 (d, J=4.4 Hz, 2H), 3.69-3.60 (m, 2H), 3.53-3.49 (m, 4H), 3.45-3.47 (m, 2H), 1.44 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 155.9 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 79.9 (C_(q)), 67.7 (CH₂), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.4 (CH₂), 41.8 (CH₂), 28.5 (3CH₃); MS: m/z=400 [M+Na]⁺;

(b) (4-methoxycarbonylphenyl)methyl 4-[2-(tert-butoxycarbonylamino)acetyl]piperazine-1-carboxylate (3b)

The crude derivative obtained following the general protocol described before was purified by flash-chromatography (eluent: EtOAc/PE 5/5) C₂₁H₂₉N₃O₇; yield 80%; white solid; m.p. 90-91° C.; M=435.47 g/mol; IR (ATR): v=2977 (w), 1703 (s), 1651 (s), 1430 (m), 1278 (m), 1223 (m), 1160 (m), 1105 (m), 1017 (m), 756 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.04 (d, J=8.4 Hz, 2H) , 7.41 (d, J=8.4 Hz, 2H), 5.47 (as, 1H), 5.20 (s, 2H), 3.97 (d, J=4.5 Hz, 2H), 3.92 (s, 3H), 3.70-3.62 (m, 2H), 3.56-3.50 (m, 4H), 3.41-3.37 (m, 2H), 1.44 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 167.3 (C_(q)), 166.8 (C_(q)), 154.9 (C_(q)), 141.4 (2C_(q)), 130.1 (C_(q)), 130.0 (2CH), 127.7 (2CH), 80.0 (C_(q)), 67.0 (CH₂), 52.3 (CH₃), 44.3 (CH₂), 43.7 (2CH₂), 42.4 (CH₂), 41.8 (CH₂), 28.5 (3CH₃); MS: m/z=458 [M+Na]⁺;

(c) 2-naphthylmethyl 4-[2-(tert-butoxycarbonylamino)acetyl]piperazine-1-carboxylate (3c)

The crude derivative obtained following the general protocol described before was purified by flash-chromatography (eluent: EtOAc/PE 5/5). C₂₃H₂₉N₃O₅; yield 91%; white solid; m.p. 41-42° C.; M=427.49 g/mol; IR (ATR): v=3332 (w), 2971 (w), 1697 (s), 1645 (s), 1460 (m), 1427 (s), 1214 (s), 1160 (m), 1117 (w), 1017 (w), 747 (w) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.87-7.82 (m, 4H), 7.53-7.45 (m, 3H), 5.48 (as, 1H), 5.31 (s, 2H), 3.96 (d, J=4.4 Hz, 2H), 3.69-3.61 (m, 2H), 3.56-3.50 (4H), 3.42-3.33 (m, 2H), 1.44 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 167.3 (C_(q)), 155.9 (C_(q)), 155.2 (C_(q)), 133.8 (C_(q)), 133.3 (C_(q)), 133.3 (C_(q)), 128.6 (CH), 128.1 (CH), 127.9 (CH), 127.5 (CH), 126.5 (CH), 126.5 (CH), 126.0 (CH), 79.9 (C_(q)), 67.9 (CH₂), 44.3 (CH₂), 43.7 (2CH₂), 42.4 (CH₂), 41.8 (CH₂), 28.5 (3CH₃); MS: m/z=450 [M+Na]⁺;

(d) (6-methoxycarbonyl-2-naphthyl)methyl 4-[2-(tert-butoxycarbonylamino)acetyl]-piperazine-1-carboxylate (3d)

The crude derivative obtained following the general protocol described before was purified by flash-chromatography (eluent: DCM/MeOH 95/5). C₂₅H₃₁N₃O₇; yield 97%; white solid; m.p. 43-44° C.; M=485.53 g/mol; IR (ATR): v=3350 (w), 2974 (w), 1697 (s), 1651 (s), 1460 (m), 1423 (s), 1366 (m), 1284 (m), 1220 (m-s), 1163 (m), 762 (w) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.60 (s, 1H), 8.08 (dd, J=8.6 Hz, J=1.6 Hz, 1H), 7.96 (d, J=8.5 Hz, 1H), 7.88 (d, J=1Hz, 1H), 7.84 (s, 1H), 7.52 (dd, J=8.4 Hz, J=1.6 Hz, 1H), 5.47 (s, 1H), 5.33 (s, CH₂), 3.99-3.98 (m, 5H), 3.70-3.62 (m, 2H), 3.58-3.52 (m, 4H), 3.41-3.36 (m, 2H), 1.44 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 167.3 (C_(q)), 155.1 (C_(q)), 136.4 (C_(q)), 135. (C_(q)), 132.3 (C_(q)), 130.9 (CH), 130.0 (CH), 128.4 (CH), 128.0 (C_(q)), 127.0 (CH), 126.6 (CH), 125.9 (CH), 80.0 (C_(q)), 67.6 (CH₂), 52.4 (CH₃), 44.3 (CH₂), 43.8 (CH₂), 43.7 (CH₂), 42.4 (CH₂), 41.8 (CH₂), 28.5 (3CH₃); MS: m/z=508 [M+Na]⁺;

(e) tert-butyl N-[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]carbamate (3e)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: PE/EtOAc 5/5) to conduct to the desired derivative. C₂₂H₃₅N₃O₄; yield 78%; white solid; m.p. 187-188° C.; M=405.53 g/mol; IR (ATR): v=3423 (w), 2904 (m), 1712 (s), 1642 (s), 1615 (s), 1442 (m-s), 1399 (m), 1153 (m), 1008 (m) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 6.75 (t, J=5.7 Hz, 1H), 3.78 (d, J=5.8Hz, 2H), 3.65-3.49 (m, 4H), 3.47-3.36 (m, 4H), 1.97 (as, 3H), 1.90 (as, 6H), 1.73-1.63 (m, 6H), 1.38 (s, 9H); ¹³C NMR (63 MHz, DMSO) δ 174.6 (C_(q)), 167.6 (C_(q)), 155.8 (C_(q)), 77.9 (C_(q)), 44.6 (2CH₂), 44.1 (CH₂), 41.7 (2CH₂), 40.9 (C_(q)), 28.4 (3CH₂), 36.0 (3CH₂), 28.2 (3CH), 27.9 (3CH₃); MS: m/z=428 [M+Na]⁺;

(f) 1-adamantylmethyl 4-[2-(tert-butoxycarbonylamino)acetyl]perazine-1-carboxylate (3f)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: PE/EtOAc 5/5). C₂₃H₃₇N₃O₅; yield 78%; white solid; m.p. 156-157° C.; M=435.56 g/mol; IR (ATR): v=3405 (w), 2907 (m), 1712 (s), 1678 (s), 1639 (s), 1475 (m-s), 1430 (s), 1229 (m-s), 1163 (m-s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 5.48 (as, 1H), 3.97 (d, J=4.4 Hz, 2H), 3.71 (s, 2H), 3.65-3.59 (m, 2H), 3.53-3.47 (m, 4H), 3.40-3.37 (m, 2H), 1.99 (as, 3H), 1.76-1.62 (m, 6H), 1.53 (d, J=2.5 Hz, 6H), 1.45 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 167.3 (C_(q)), 155.9 (C_(q)), 155.7 (C_(q)), 79.9 (C_(q)), 75.6 (CH₂), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.4 (CH₂), 41.9 (CH₂), 39.5 (3CH₂), 37.1 (3CH₂), 33.6 (C_(q)), 28.5 (3CH₃), 28.1 (3CH); MS: m/z=458 [M+Na]⁺;

(g) 2-(1-adamantyl)ethyl 4-[2-(tert-butoxycarbonylamino)acetyl]perazine-1-carboxylate (3g)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: PE/EtOAc 5/5). C₂₄H₃₉N₃O₅; yield 78%; white solid; m.p. 167-168° C.; M=449.58 g/mol; IR (ATR): v=3362 (w), 2898 (m), 2844 (w), 1706 (m-s), 1687 (m-s), 1645 (s), 1463 (m), 1427 (m-s), 1217 (s), 1156 (m), 1123 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 5.48 (as, 1H), 4.14 (t, J=7.3 Hz, 2H), 3.95 (d, J=4.4 Hz, 2H), 3.62-3.58 (m, 2H), 3.47-3.41 (m, 4H), 3.37-3.34 (m, 2H), 1.93 (as, 3H), 1.72-1.58 (m, 6H), 1.51 (d, J=2.5 Hz, 6H), 1.43-1.39 (m, 11H); ¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 155.9 (C_(q)), 155.5 (C_(q)), 79.9 (C_(q)), 62.5 (CH₂), 44.3 (CH₂), 43.6 (CH₂), 43.5 (CH₂), 42.9 (CH₂), 42.7 (3CH₂), 42.4 (CH₂), 41.9 (CH₂), 37.1 (3CH₂), 31.9 (C_(q)), 28.7 (3CH), 28.5 (3CH₃); MS: m/z=472 [M+Na]⁺;

(h) benzyl 4-[(2R)-2-(tert-butoxycarbonylamino)propanoyl]piperazine-1-carboxylate (3i)

The crude derivative obtained following the general protocol described before was subsequently used without any further purification. C₂₀H₂₉N₃O₅; colorless viscous oil; yield 90%; M=391.46 g/mol; IR (ATR): v=2980 (w), 1700 (s), 1645 (s), 1423 (m), 1217 (m), 1160 (m), 1014 (m), 765 (w), 695 (w) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.39-7.32 (m, 5H), 5.49 (d, J=8.1 Hz, 1H), 5.15 (s, 2H), 4.60 (p, J=7.1 Hz, 1H), 3.74-3.39 (m, 8H), 1.43 (s, 9H), 1.29 (d, J=6.9 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 171.6 (C_(q)), 155.2 (2C_(q)), 136.4 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 79.9 (C_(q)), 67.7 (CH₂), 46.2 (CH), 45.3 (CH₂), 44.0 (CH₂), 43.7 (CH₂), 42.0 (CH₂), 28.5 (3CH₃), 19.3 (CH₃); MS: m/z=414 [M+Na]⁺;

(i) benzyl 4-[(2S)-2-(tert-butoxycarbonylamino)propanoyl]perazine-1-carboxylate (3j)

The crude derivative obtained following the general protocol described before was subsequently used without any further purification. C₂₀H₂₉N₃O₅; colorless viscous oil; yield 90%; M=391.46 g/mol; IR (ATR): v=2974 (w), 1694 (s), 1639 (s), 1433 (m), 1220 (m), 1163 (m), 1014 (m), 762 (w), 698 (w) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.40-7.30 (m, 5H), 5.47 (d, J=7.9 Hz, 1H), 5.15 (s, 2H), 4.60 (p, J=7.1 Hz, 1H), 3.76-3.39 (m, 8H), 1.43 (s, 9H), 1.29 (d, J=6.9 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 184.8 (C_(q)), 171.6 (C_(q)), 155.2 (2C_(q)), 136.4 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 79.9 (C_(q)), 67.7 (CH₂), 46.2 (CH), 45.3 (CH₂), 44.0 (CH₂), 43.7 (CH₂), 42.0 (CH₂), 28.5 (3CH₃), 19.5 (CH₃); MS: m/z=414 [M+Na]⁺;

(j) benzyl 4-[(2R)-2-(tert-butoxycarbonylamino)-3-phenyl-propanoyl]piperazine-1-carboxylate (3k)

The crude derivative obtained following the general protocol described before was subsequently used without any further purification. C₂₆H₃₃N₃O₅; colorless viscous oil; yield 97%; M=467.56 g/mol; IR (ATR): v=3314 (w), 2968 (w), 1700 (s), 1636 (s), 1423 (m), 1220 (m-s), 1163 (m-s), 1011 (w-m), 750 (w), 698 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.17 (m, 10H), 5.41 (d, J=8.6 Hz, 1H), 5.10 (s, 2H), 4.85-4.75 (m, 1H), 3.60-3.14 (m, 6H), 3.06-2.87 (m, 3H), 2.66-2.57 (m, 1H), 1.42 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 170.6 (C_(q)), 155.2 (C_(q)), 155.1 (C_(q)), 136.5 (C_(q)), 136.4 (C_(q)), 129.7 (2CH), 128.8 (2CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.3 (CH), 80.1 (C_(q)), 67.6 (CH₂), 51.1 (CH), 45.4 (CH₂), 43.4 (CH₂), 43.4 (CH₂), 41.8 (CH₂), 40.6 (CH₂), 28.5 (3CH₃); MS: m/z=490 [M+Na]⁺;

(k) benzyl 4-[(2S)-2-(tert-butoxycarbonylamino)-3-phenyl-propanoyl]perazine-1-carboxylate (3l)

The crude derivative obtained following the general protocol described before was subsequently used without any further purification. C₂₆H₃₃N₃O₅; colorless viscous oil; yield 97%; M=467.56 g/mol; IR (ATR): v=2971 (w), 1700 (s), 1633 (s), 1420 (m), 1220 (s), 1163 (s), 1011 (m), 695 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.17 (m, 10H), 5.41 (d, J=8.5 Hz, 1H), 5.10 (s, 2H), 4.85-4.75 (m, 1H), 3.60-3.38 (m, 3H), 3.33-3.14 (m, 3H), 3.06-2.87 (m, 3H), 2.67-2.57 (m, 1H), 1.42 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 170.6 (C_(q)), 155.2 (C_(q)), 155.1 (C_(q)), 136.5 (C_(q)), 136.4 (C_(q)), 129.7 (2CH), 128.8 (2CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.3 (CH), 80.1 (C_(q)), 67.6 (CH₂), 51.1 (CH), 45.4 (CH₂), 43.4 (2CH₂), 41.8 (CH₂), 40.6 (CH₂), 28.5 (3CH₃); MS: m/z=490 [M+Na]⁺;

General Protocol for the Carbamate Deprotection Step (D)

The previously obtained carbamate (1.2 mmol) was dissolved in DCM (15 ml) and reacted with an excess of trifluoroacetic acid (9.6 mmol, 8 eq.) at room temperature, until the complete consumption of the starting material (generally 3 h). At the end of the reaction, the mixture was diluted with DCM (35 ml) and washed with hydrogen chloride (aq. soln. 0.5 M, 3×50 ml). The pH of the combined aqueous layers was adjusted to 9-10 by addition of potassium carbonate (satd. soln.), then extracted with DCM (3×75 ml). The combined organic layers were dried over magnesium sulfate and the solvent evaporated under reduced pressure. The obtained amine was used further without any other purification.

(a) benzyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4a)

C₁₄H₁₉N₃O₃; yield 82%; white solid; m.p. 52-53° C.; M=277.32 g/mol; IR (ATR): v=3526 (w), 2901 (w), 1678 (s), 1642 (s), 1420 (m-s), 1363 (w), 1281 (w), 1229 (s), 1123 (m-s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.38-7.32 (m, 5H), 5.14 (s, 2H), 3.70-3.58 (m, 2H), 3.52-3.50 (m, 4H), 3.47 (s, 2H), 3.43-3.30 (m, 2H), 1.80 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 171.5 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 128.6 (2CH), 128.3 (CH), 128.1 (2CH), 67.6 (CH₂), 44.1 (CH₂), 43.7 (2CH₂), 43.4 (CH₂), 41.8 (CH₂); MS: m/z=278 [M+H]⁺;

(b) (4-methoxycarbonylphenyl)methyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4b)

C₁₆H₂₁N₃O₃; yield 88%; light-yellow solid; m.p. 94-95° C.; M=335.36 g/mol; IR (ATR): v=3520 (w), 3350 (w), 2904 (w), 1715 (s), 1691 (s), 1624 (m-s), 1448 (m-s), 1430 (s), 1275 (s), 1226 (s), 1111 (s), 1065 (m), 759 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.03 (d, J=8.3 Hz, 2H), 7.41 (d, J=8.3 Hz, 2H), 5.20 (s, 2H), 3.92 (s, 3H), 3.69-3.59 (m, 2H), 3.54-3.52 (m, 4H), 3.47 (s, 2H), 3.40-3.33 (m, 2H), 1.62 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 171.6 (C_(q)), 166.8 (C_(q)), 155.0 (C_(q)), 141.5 (C_(q)), 130.1 (C_(q)), 130.0 (2CH), 127.7 (2CH), 66.9 (CH₂), 52.3 (CH₃), 44.1 (CH₂), 43.8 (2CH₂), 43.5 (CH₂), 41.8 (CH₂); MS: m/z=336 [M+H]⁺;

(c) 2-naphthylmethyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4c)

C₁₈H₂₁N₃O₃; yield 61%; white solid; m.p. 109-110° C.; M=327.38 g/mol; IR (ATR): v=3526 (w), 3350 (w), 2907 (w), 1691 (s), 1618 (s), 1445 (m), 1433 (s), 1281 (m-s), 1220 (s), 804 (s), 735 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.86-7.82 (m, 4H), 7.53-7.45 (m, 3H), 5.31 (s, 2H), 3.70-3.58 (m, 2H), 3.57-3.50 (m, 4H), 3.46 (s, 2H), 3.43-3.30 (m, 2H), 1.64 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 171.6 (C_(q)), 133.8 (C_(q)), 133.3 (C_(q)), 128.6 (CH), 128.1 (CH), 127.9 (CH), 127.4 (CH), 126.5 (CH), 126.5 (CH), 126.0 (CH), 67.9 (CH₂), 44.1 (CH₂), 43.8 (2CH₂), 43.5 (CH₂), 41.9 (CH₂); MS: m/z=328 [M+H]⁺;

(d) (6-methoxycarbonyl-2-naphthyl)methyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4d)

C₂₀H₂₃N₃O₅; yield 79%; light yellow solid; m.p. 91-92° C.; M=385.41 g/mol; IR (ATR): v=2953 (w), 1718 (m), 1687 (s), 1639 (m), 1423 (m), 1281 (m), 1226 (m), 1196 (m), 1126 (m), 1075 (w), 759 (w-m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.60 (s, 1H), 8.08 (dd, J=8.6 Hz, J=1.7 Hz, 1H), 7.96 (d, J=8.5 Hz, 1H), 7.88 (d, J=8.7 Hz, 1H), 7.84 (s, 1H), 7.53 (dd, J=8.5 Hz, J=1.6 Hz, 1H), 5.33 (s, 2H), 3.99 (s, 3H), 3.69-3.63 (m, 2H), 3.57-3.54 (m, 4H), 3.47 (s, 2H), 3.40-3.34 (m, 2H), 1.60 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 171.7 (C_(q)), 167.3 (C_(q)), 155.1 (C_(q)), 136.5 (C_(q)), 135.5 (C_(q)), 132.3 (C_(q)), 130.9 (CH), 130.0 (CH), 128.4 (CH), 128.0 (C_(q)), 126.9 (CH), 126.6 (CH), 125.9 (CH), 67.5 (CH₂), 52.4 (CH₃), 44.1 (CH₂), 43.8 (2CH₂), 43.5 (CH₂), 41.9 (CH₂); MS: m/z=386 [M+H]⁺;

(e) 1-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-amino-ethanone (4e)

C₁₇H₂₇N₃O₂; yield 47%; white solid; m.p. 231-132° C.; M=305.42 g/mol; IR (ATR): v=2904 (m), 2844 (w), 1697 (w), 1606 (s), 1414 (m), 1226 (m), 1005 (m-s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 3.70-3.62 (m, 6H), 3.47 (s, 2H), 3.38-3.34 (m, 2H), 2.04 (as, 3H), 1.98-1.97 (m, 6H), 1.77-1.66 (m, 6H), 1.60 (s, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 176.2 (C_(q)), 171.7 (C_(q)), 45.6 (CH₂), 44.8 (CH₂), 44.4 (CH₂), 43.5 (CH₂), 42.3 (CH₂), 41.9 (C_(q)), 39.2 (3CH₂), 36.7 (3CH₂), 28.5 (3CH); MS: m/z=306 [M+H]⁺;

(f) 1-adamantylmethyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4f)

C₁₈H₂₉N₃O₃; yield 60%; colorless viscous oil; M=335.44 g/mol; IR (ATR): v=3384 (w), 2901 (m-s), 2847 (m), 1694 (s), 1627 (s), 1457 (m), 1423 (s), 1223 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 3.70 (s, 2H), 3.66-3.59 (m, 2H), 3.53-3.48 (m, 6H), 3.41-3.35 (m, 2H), 2.04 (as, 3H), 1.76-1.61 (m, 8H), 1.53 (d, J=2.5 Hz, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 171.5 (C_(q)), 155.7 (C_(q)), 75.6 (CH₂), 44.1 (CH₂), 43.6 (2CH₂), 43.4 (CH₂), 41.9 (CH₂), 39.5 (3CH₂), 37.1 (3CH₂), 33.6 (C_(q)), 28.1 (3CH); MS: m/z=336 [M+H]⁺;

(g) 2-(1-adamantyl)ethyl 4-(2-aminoacety0piperazine-1-carboxylate (4g)

C₁₉H₃₁N₃O₃; yield 72%; light yellow viscous oil becoming light yellow solid on standing; m.p. 58-59° C.; M=349.47 g/mol; IR (ATR): v=3375 (m), 2892 (s), 2844 (m), 1697 (s), 1639 (s), 1448 (m), 1417 (s), 1375 (m), 1220 (s), 1123 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 4.15 (t, J=7.2 Hz, 2H), 3.67-3.59 (m, 2H), 3.54-3.48 (m, 6H), 3.37-3.33 (m, 2H), 1.93 (as, 3H), 1.72-1.58 (m, 6H), 1.51 (d, J=2.5 Hz, 6H), 1.42 (t, J=7.3 Hz, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 171.1 (C_(q)), 155.5 (C_(q)), 62.4 (CH₂), 44.2 (CH₂), 43.6 (2CH₂), 43.2 (CH₂), 42.9 (CH₂), 42.7 (3CH₂), 41.9 (CH₂), 37.1 (3CH₂), 31.9 (C_(q)), 28.7 (3CH); MS: m/z=350 [M+H]⁺;

(h) 2-amino-1-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]ethanone (4 h)

C₁₈H₂₄N₄O₃S; yield 95%; yellow solid; m.p. 82-83° C.; M=376.47 g/mol; IR (ATR): v=3441 (w), 2932 (w), 1654 (m-s), 1636 (m-s), 1451 (m), 1342 (m), 1323 (m), 1156 (s), 1144 (s), 941 (m-s), 896 (m), 789 (s), 707 (s), 619 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.58 (d, J=8.5 Hz, 1H), 8.36 (d, J=8.7 Hz, 1H), 8.19 (dd, J=7.4 Hz, J=1.2 Hz, 1H), 7.53 (dd, J=8.5 Hz, J=7.6 Hz, 2H), 7.18 (d, J=7.5 Hz, 1H), 3.72-3.57 (m, 2H), 3.50-3.31 (m, 4H), 3.23-3.10 (m, 4H), 2.88 (s, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 171.2 (C_(q)), 152.0 (C_(q)), 132.2 (C_(q)), 131.2 (CH), 130.9 (CH), 130.4 (C_(q)), 130.2 (C_(q)), 128.4 (CH), 123.3 (CH), 119.4 (CH), 115.5 (CH), 45.6 (CH₂), 45.5 (2CH₃), 45.5 (CH₂), 44.0 (CH₂), 43.2 (CH₂), 41.6 (CH₂); MS: m/z=377 [M+H]⁺;

(i) benzyl 4-[(2R)-2-aminopropanoyl]piperazine-1-carboxylate (4i)

C₁₅H₂₁N₃O₃; colorless viscous oil; yield 41%; M=291.35 g/mol; IR (ATR): v=3372 (w), 2922 (w), 1694 (s), 1639 (s), 1466 (w), 1417 (m-s), 1223 (s), 1117 (m), 1072 (m), 1020 (m), 729 (m), 698 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.38-7.31 (m, 5H), 5.15 (s, 2H), 3.90-3.36 (m, 9H), 1.83 (s, 2H), 1.25 (d, J=6.7 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 174.9 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 67.7 (CH₂), 47.1 (CH), 45.0 (CH₂), 44.0 (CH₂), 43.8 (CH₂), 42.0 (CH₂), 21.7 (CH₃); MS: m/z=292 [M+H]⁺;

(j) benzyl 4-[(2S)-2-aminopropanoyl]piperazine-1-carboxylate (4_(j))

C₁₅H₂₁N₃O₃; colorless viscous oil becoming white solid on standing; m.p.: 53-54° C.; yield 35%; M=291.35 g/mol; IR (ATR): v=2965 (w), 1697 (s), 1633 (s), 1420 (s), 1366 (m), 1223 (s), 1129 (m-s), 984 (m), 886 (m), 732 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.40-7.31 (m, 5H), 5.14 (s, 2H), 3.85-3.36 (m, 9H), 1.81 (s, 2H), 1.25 (d, J=6.8 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 174.9 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 67.7 (CH₂), 47.1 (CH), 45.0 (CH₂), 44.0 (CH₂), 43.8 (CH₂), 41.9 (CH₂), 21.8 (CH₃); MS: m/z=292 [M+H]⁺;

(k) benzyl 4-[(2R)-2-amino-3-phenyl-propanoyl]piperazine-1-carboxylate (4k)

C₂₁H₂₅N₃O₃; light yellow viscous oil; yield 64%; M=367.44 g/mol; IR (ATR): v=3365 (w), 2913 (w), 1697 (s), 1633 (s), 1427 (m), 1223 (s), 1117 (w), 747 (m), 695 (m-s); ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.16 (m, 10H), 5.10 (s, 2H), 3.94 (as, 1H), 3.66-3.19 (m, 6H), 3.05-2.97 (m, 1H), 2.94-2.81 (m, 2H), 2.76-2.68 (m, 1H), 1.89 (broad s, 2H); MS: m/z=368 [M+H]⁺;

(I) benzyl 4-[(2S)-2-amino-3-phenyl-propanoyl]perazine-1-carboxylate (4l)

C₂₁H₂₅N₃O₃; light yellow viscous oil; yield 46%; M=367.44 g/mol; IR (ATR): v=3372 (w), 2919 (w), 1694 (s), 1636 (s), 1423 (s), 1226 (s), 1114 (m), 741 (m), 692 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.16 (m, 10H), 5.11 (CH₂), 3.69-2.83 (m, 10H), 2.74-2.67 (m, 1H), 1.76 (broad s, 2H); MS: m/z=368 [M+H]⁺;

(m) Synthesis of tert-butyl 4-(2-aminoacetyl)piperazine-1-carboxylate (4m)

4-(2-bromoacetyl)piperazine-1-carboxylate (9.77 mmol, 1 eq.) in methanol (26 ml) at 0° C. The reaction vial was sealed and the mixture stirred vigorously overnight at room temperature. The solvent was subsequently evaporated, the residue dissolved in hydrogen chloride (aqueous soln., 0.1 N, 100 ml) and extracted with ethyl acetate (3×100 ml). The pH of the recovered aqueous layer was adjusted to 10 by addition of sodium hydroxide (aqueous soln., 1N), then the organics extracted with ethyl acetate (3×100 ml). The combined organic layers were dried over magnesium sulfate, filtered and the solvent evaporated under vacuum to give a light yellow crude product. Further trituration in diethyl ether conducted to the desired amine as a white solid used for the next step without additional purification. C₁₁H₂₁N₃O₃; yield 58%; white solid; m.p. 159-160° C.; M=243.30 g/mol; IR (ATR): v=2974 (w), 1675 (s), 1627 (s), 1417 (m), 1360 (m), 1235 (m), 1172 (m), 1123 (m), 990 (m), 759 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 3.71-3.41 (m, 10H), 1.46 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 169.5 (C_(q)), 154.6 (C_(q)), 80.5 (C_(q)), 50.4 (CH₂), 44.6 (2CH₂), 41.7 (2CH₂); HRMS: calcd. for C₁₁H₂₁N₃O₃ 244.1661, found. 244.1657;

Synthesis of the acrylamide Derivatives (E)

Triethylamine (1.25 mmol, 5 eq.) was added to a solution of the previously obtained amine (0.25 mmol, 1 eq.) in acetonitrile (5 ml). The mixture was cooled to 0° C. and acryloyl chloride (0.63 mmol, 2.5 eq.) was subsequently added under nitrogen. After 3 h of stirring at 0° C., the reaction mixture was diluted with ethyl acetate (100 ml) and washed with sodium bicarbonate (satd. aq. soln., 3×50 ml). The recovered organic phase was dried over magnesium sulfate and then the solvent evaporated under reduced pressure to give the crude product.

(a) benzyl 4-[2-(prop-2-enoylamino)acetyl]piperazine-1-carboxylate (5a)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: DCM/MeOH 96/4). C₁₇H₂₁N₃O₄; yield 56%; colorless viscous oil; M=331.37 g/mol; IR (ATR): v=3004 (w), 1691 (s), 1636 (s), 1420 (s), 1223 (s), 744 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.42-7.32 (m, 5H), 6.73 (as, 1H), 6.32 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.8 Hz, 1H), 5.68 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 5.15 (s, 2H), 4.15 (d, J=4.0 Hz, 2H), 3.70-3.62 (m, 2H), 3.57-3.50 (m, 4H), 3.43-3.36 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.8 (C_(q)), 165.5 (C_(q)), 155.2 (C_(q)), 136.3 (C_(q)), 130.4 (CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.1 (CH₂), 67.8 (CH₂), 44.4 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 41.9 (CH₂), 41.4 (CH₂); MS: m/z=354 [M+Na]⁺; HRMS: calcd. for C₁₇H₂₂O₄N₃ 332.1605, found 332.1610 (1.6 ppm).

(b) (4-methoxycarbonylphenyl)methyl 4-[2-(prop-2-enoylamino)acetyl]piperazine-1-carboxylate (5b)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: DCM/MeOH 97/3). C₁₉H₂₃N₃O₆; yield 60%; white solid; m.p. 159-160° C.; M=389.40 g/mol; IR (ATR): v=3284 (w), 2898 (w), 1703 (s), 1648 (s), 1427 (s), 1278 (m), 1214 (m), 1105 (m), 759 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.04 (d, J=8.4 Hz, 2H), 7.42 (d, J=8.4 Hz, 2H), 6.68 (as, 1H), 6.33 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, 9.9 Hz, 1H), 5.69 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 5.21 (s, 2H), 4.15 (d, J=4.1 Hz, 2H), 3.92 (s, 3H), 3.68-3.63 (m, 2H), 3.59-3.52 (m, 4H), 3.49-3.39 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.8 (C_(q)), 165.5 (C_(q)), 154.9 (C_(q)), 141.4 (C_(q)), 130.4 (CH), 130.2 (C_(q)), 130.0 (2CH), 127.7 (2CH), 127.0 (CH₂), 67.0 (CH₂), 52.3 (CH₃), 44.3 (CH₂), 43.8 (CH₂), 43.7 (CH₂), 41.9 (CH₂), 41.4 (CH₂); MS: m/z=412 [M+Na]⁺; HRMS: calcd. for C₁₉H₂₄o₆N₃ 390.1660, found 390.1663 (0.9 ppm).

(c) 2-naphthylmethyl 4-[2-(prop-2-enoylamino)acetyl]piperazine-1-carboxylate (5c)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₁H₂₃N₃O₄; yield 59%; white solid; m.p. 125-126° C.; M=381.43 g/mol; IR (ATR): v=3332 (w), 2925 (w), 1703 (s), 1663 (m), 1642 (s), 1621 (s), 1460 (m), 1436 (m), 1417 (m), 1220 (s), 817 (w), 750 (w) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.86-7.82 (m, 4H), 7.53-7.54 (m, 3H), 6.71 (as, 1H), 6.31 (dd, J=17.0 Hz, J=2.0 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.7 Hz, 1H), 5.67 (dd, J=9.7 Hz, J=2.0 Hz, 1H), 5.32 (s, 2H), 4.14 (d, J=4.0 Hz, 2H), 3.65-3.42 (m, 8H); ¹³C NMR (63 MHz, CDCl₃) δ 166.7 (C_(q)), 165.5 (C_(q)), 155.2 (C_(q)), 133.7 (C_(q)), 133.3 (C_(q)), 133.3 (C_(q)), 130.4 (CH), 128.6 (CH), 128.1 (CH), 127.9 (CH), 127.5 (CH), 127.1 (CH₂), 126.5 (CH), 126.5 (CH), 126.0 (CH), 68.0 (CH₂), 44.4 (CH₂), 43.8 (CH₂), 43.6 (CH₂), 41.9 (CH₂), 41.4 (CH₂); MS: m/z=404 [M+Na]⁺; HRMS: calcd. for C₂₁H₂₄O₄N₃ 382.1761, found 382.1765 (1.0 ppm).

(d) (6-methoxycarbonyl-2-naphthyl)methyl 4-[2-(prop-2-enoylamino)acetyl]piperazine-1-carboxylate (5d)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₃H₂₅N₃O₆; yield 71%; white solid; m.p. 159-160° C.; M=439.46 g/mol; IR (ATR): v=3338 (w), 2938 (w), 1697 (s), 1666 (s), 1648 (s), 1618 (s), 1430 (s), 1290 (s), 1217 (m), 1123 (m), 804 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.60 (s, 1H), 8.08 (dd, J=8.6 Hz, J=1.7 Hz, 1H), 7.96 (d, J=8.5 Hz, 1H), 7.88 (d, J=8.7 Hz, 1H), 7.85 (s, 1H), 7.53 (dd, J=8.5 Hz, J=1.6 Hz, 1H), 6.70 (as, 1H), 6.32 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.8 Hz, 1H), 5.68 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 5.33 (s, 2H), 4.15 (d, J=4.1 Hz, 2H), 3.98 (s, 3H), 3.68-3.64 (m, 2H), 3.60-3.53 (m, 4H), 3.50-3.38 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 166.8 (C_(q)), 165.5 (C_(q)), 155.1 (C_(q)), 136.4 (C_(q)), 135.5 (C_(q)), 132.2 (C_(q)), 130.9 (CH), 130.4 (CH), 130.0 (CH), 128.4 (CH), 128.0 (C_(q)), 127.1 (CH₂), 127.0 (CH), 126.6 (CH), 125.9 (CH), 67.6 (CH₂), 52.4 (CH₃), 44.3 (CH₂), 43.8 (CH₂), 43.7 (CH₂), 41.9 (CH₂), 41.4 (CH₂); MS: m/z=462 [M+Na]⁺; HRMS: calcd. for C₂₃H₂₆O₆N₃ 440.1816 , found 440.1814 (0.5 ppm).

(e) N-[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]prop-2-enamide (5e)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc).C₂₀H₂₉N₃O₃; yield 41%; white solid; m.p. 195-196° C.; M=359.46 g/mol; IR (ATR): v=3311 (w), 2910 (m), 1675 (m-s), 1642 (m), 1599 (s), 1557 (m), 1417 (m), 1223 (s), 1008 (m-s), 947 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 6.68 (as, 1H), 6.32 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.9 Hz, 1H), 5.69 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 4.15 (d, J=4.1 Hz, 2H), 3.75-3.71 (m, 4H), 3.66-3.63 (m, 2H), 3.45-3.41 (m, 2H), 2.06 (as, 3H), 1.99-1.98 (m, 6H), 1.79-1.68 (m, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 176.3 (C_(q)), 166.8 (C_(q)), 165.5 (C_(q)), 130.5 (CH), 127.1 (CH₂), 45.3 (CH₂), 44.9 (CH₂), 44.7 (CH₂), 42.4 (CH₂), 42.0 (C_(q)), 41.4 (CH₂), 39.2 (3CH₂), 36.7 (3CH₂), 28.5 (3CH); MS: m/z=382 [M+Na]⁺; HRMS: calcd. for C₂₀H₃₀O₃N₃ 360.2282 , found 360.2287 (1.5 ppm).

(f) 1-adamantylmethyl 4-[2-(prop-2-enoylamino)acetyl]perazine-1-carboxylate (5f)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₁H₃₁N₃O₄; yield 48%; white solid; m.p. 176-177° C.; M=389.49 g/mol; IR (ATR): v=3335 (w), 2892 (m), 2844 (w), 1687 (s), 1672 (m), 1621 (s), 1469 (m), 1420 (s), 1251 (m), 1223 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 6.70 (as, 1H), 6.32 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.8 Hz, 1H), 5.68 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 4.16 (d, J=4.1 Hz, 2H), 3.71 (s, 2H), 3.68-3.62 (m, 2H), 3.56-3.49 (m, 4H), 3.46-3.42 (m, 2H), 1.99 (as, 3H), 1.77-1.62 (m, 6H), 1.53 (d, J=2.5 Hz, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 166.8 (C_(q)), 165.5 (C_(q)), 155.7 (C_(q)), 130.5 (CH), 127.1 (CH₂), 75.7 (CH₂), 44.4 (CH₂), 43.7 (CH₂), 43.5 (CH₂), 42.0 (CH₂), 41.5 (CH₂), 39.5 (3CH₂), 37.1 (3CH₂), 33.6 (C_(q)), 28.1 (3CH); MS: m/z=412 [M+Na]⁺; HRMS: calcd. for C₂₁H₃₂O₄N₃ 390.2387, found 390.2391 (0.9 ppm).

(g) 2-(1-adamantyl)ethyl 4-[2-(prop-2-enoylamino)acetyl]piperazine-1-carboxylate (5g)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₂H₃₃N₃O₄; yield 54%; white solid; m.p. 155-156° C.; M=403.52 g/mol; IR (ATR): v=3317 (w), 2901 (m-s), 2847 (w), 1684 (s), 1624 (s), 1469 (m), 1427 (s), 1223 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 6.73 (as, 1H), 6.32 (dd, J=17.0 Hz, J=1.9 Hz, 1H), 6.18 (dd, J=17.0 Hz, J=9.8 Hz, 1H), 5.68 (dd, J=9.8 Hz, J=1.9 Hz, 1H), 4.19-4.13 (m, 4H), 3.65-3.61 (m, 2H), 3.50-3.46 (m, 4H), 3.43-3.39 (m, 2H), 1.94 (as, 3H), 1.73-1.59 (m, 6H), 1.52 (d, J=2.4 Hz, 6H), 1.43 (t, J=7.3 Hz, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.7 (C_(q)), 165.5 (C_(q)), 155.5 (C_(q)), 130.5 (CH), 127.0 (CH₂), 62.5 (CH₂), 44.4 (CH₂), 43.6 (CH₂), 43.5 (CH₂), 42.9 (CH₂), 42.7 (3CH₂), 42.0 (CH₂), 41.4 (CH₂), 37.1 (3CH₂), 31.9 (C_(q)), 28.7 (3CH); MS: m/z=426 [M+Na]⁺; HRMS: calcd. for C₂₂H₃₄O₄N₃ 404.2544, found 404.2547 (0.8 ppm).

(h) N-[2-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]-2-oxo-ethyl]prop-2-enamide (5 h)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₁₈H₂₄N₄O₃S; yield 39%; light yellow solid; m.p. 185-186° C.; M=430.52 g/mol; IR (ATR): v=2935 (w), 1651 (s), 1454 (m), 1436 (m), 1311 (m), 1141 (s), 941 (s), 789 (s), 704 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.59 (d, J=8.5 Hz, 1H), 8.35 (d, J=8.7 Hz, 1H), 8.21 (dd, J=7.4 Hz, J=1.2 Hz, 1H), 7.55 (dd, J=8.5 Hz, J=7.5 Hz, 2H), 7.19 (d, J=7.5 Hz, 1H), 6.58 (as, 1H), 6.28 (dd, J=17.0 Hz, J=1.8 Hz, 1H), 6.13 (dd, J=17.0 Hz, J=9.9 Hz, 1H), 5.65 (dd, J=9.9 Hz, J=1.8 Hz, 1H), 4.05 (d, J=4.1 Hz, 2H), 3.68 (t, J=5.1 Hz, 2H), 3.47 (t, J=5.0 Hz, 2H), 3.21 (dt, J=9.8 Hz, J=4.7 Hz, 4H), 2.89 (s, 6H); ¹³0 NMR (63 MHz, CDCl₃) δ 166.5 (C_(q)), 165.4 (C_(q)), 152.1 (C_(q)), 132.2 (C_(q)), 131.4 (CH), 131.0 (CH), 130.4 (C_(q)), 130.3 (CH), 130.3 (C_(q)), 128.5 (CH), 127.1 (CH₂), 123.3 (CH), 119.3 (CH), 115.6 (CH), 45.6 (CH₂), 45.6 (2CH₃), 45.4 (CH₂), 44.3 (CH₂), 41.8 (CH₂), 41.3 (CH₂); MS: m/z=453 [M+Na]⁺; HRMS: calcd. for C₂₁H₂₇O₄N₄S 431.1748, found 431.1751 (0.8 ppm).

(i) benzyl 4-[(2R)-2-(prop-2-enoylamino)propanoyl]piperazine-1-carboxylate (5i)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₁₈H₂₃N₃O₄; colorless viscous oil; yield 73%; M=345.39 g/mol; IR (ATR): v=3290 (w), 2929 (w), 1697 (s), 1621 (s), 1423 (s), 1220 (s), 1020 (m), 759 (m), 695 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.32 (m, 5H), 6.71 (d, J=7.1 Hz, 1H), 6.30 (dd, J=17.0 Hz, J=1.7 Hz, 1H), 6.12 (dd, J=17.0 Hz, J=10.0 Hz, 1H), 5.66 (dd, J=10.0 Hz, J=1.7 Hz, 1H), 5.15 (s, 2H), 4.96 (p, J=6.9 Hz, 1H), 3.79-3.40 (m, 8H), 1.36 (d, J=6.8 Hz, 3H); ¹³0 NMR (63 MHz, CDCl₃) δ 171.2 (C_(q)), 164.7 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 130.7 (CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.0 (CH₂), 67.7 (CH₂), 45.4 (CH₂), 45.3 (CH), 44.0 (CH₂), 43.7 (CH₂), 42.1 (CH₂), 19.2 (CH₃); MS: m/z=368 [M+Na]⁺; HRMS: calcd. for C₁₈H₂₄O₄N₃ 346.1761, found 346.1767 (1.6 ppm).

(j) benzyl 4-[(2S)-2-(prop-2-enoylamino)propanoyl]perazine-1-carboxylate (5j)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₁₈H₂₃N₃O₄; white solid; m.p. 121-122° C.; yield 72%; M=345.39 g/mol; IR (ATR): v=3271 (w), 2929 (w), 1697 (s), 1624 (s), 1423 (s), 1223 (s), 1117 (w-m), 1011 (m), 759 (m), 695 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.40-7.35 (m, 5H), 6.71 (d, J=7.1 Hz, 1H), 6.29 (dd, J=17.0 Hz, J=1.6 Hz, 1H), 6.12 (dd, J=17.0 Hz, J=10.0 Hz, 1H), 5.66 (dd, J=10.0 Hz, J=1.6 Hz, 1H), 5.15 (d, 2H), 4.96 (p, J=7.0 Hz, 1H), 3.81-3.40 (m, 8H), 1.35 (d, J=6.8 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 171.1 (C_(q)), 164.6 (C_(q)), 155.1 (C_(q)), 136.3 (C_(q)), 130.7 (CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.0 (CH₂), 67.7 (CH₂), 45.3 (CH₂), 45.2 (CH), 43.9 (CH₂), 43.6 (CH₂), 42.0 (CH₂), 19.2 (CH₃); MS: m/z=368 [M+Na]⁺; HRMS: calcd. for C₁₈H₂₄O₄N₃ 346.1761, found 346.1767 (1.6 ppm).

(k) benzyl 4-[(2R)-3-phenyl-2-(prop-2-enoylamino)propanoyl]piperazine-1-carboxylate (5k)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₄H₂₇N₃O₄; colorless viscous oil; yield 79%; M=421.49 g/mol; IR (ATR): v=3284 (w), 2929 (w), 1700 (s), 1621 (s), 1423 (s), 1220 (s), 729 (m), 692 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.18 (m, 10H), 6.77 (d, J=8.0 Hz, 1H), 6.31 (dd, J=17.0 Hz, J=1.6 Hz, 1H), 6.12 (dd, J=17.0 Hz, J=10.1 Hz, 1H), 5.67 (dd, J=10.1 Hz, J=1.6 Hz, 1H), 5.20 (td, J=9.0 Hz, J=5.3 Hz, 1H), 5.10 (s, 2H), 3.59-2.92 (m, 9H), 2.68-2.58 (m, 1H); ¹³C NMR (63 MHz, CDCl₃) δ 170.2 (C_(q)), 164.9 (C_(q)), 155.0 (C_(q)), 136.4 (C_(q)), 136.0 (C_(q)), 130.5 (CH), 129.6 (2CH), 128.8 (2CH), 128.7 (2CH), 128.3 (CH), 128.1 (2CH), 127.5 (CH), 127.3 (CH₂), 67.6 (CH₂), 49.9 (CH), 45.4 (CH₂), 43.3 (2CH₂), 41.8 (CH₂), 40.1 (CH₂); MS: m/z=444 [M+Na]⁺; HRMS: calcd. for C₂₄H₂₈O₄N₃ 422.2074, found 422.2077 (0.6 ppm).

(l) benzyl 4-[(2S)-3-phenyl-2-(prop-2-enoylamino)propanoyl]piperazine-1-carboxylate (5f)

The crude derivative obtained following the general protocol described before was subsequently purified by flash chromatography (eluent: EtOAc). C₂₄H₂₇N₃O₄; colorless viscous oil; yield 65%; M=421.49 g/mol; IR (ATR): v=3287 (w), 2925 (w), 1697 (s), 1621 (s), 1423 (s), 1220 (s), 1123 (w), 729 (m), 695 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.18 (m, 10H), 6.77 (d, J=8.0 Hz, 1H), 6.31 (dd, J=17.0 Hz, J=1.6 Hz, 1H), 6.12 (dd, J=17.0 Hz, J=10.1 Hz, 1H), 5.67 (dd, J=10.1 Hz, J=1.6 Hz, 1H), 5.23 (td, J=9.0 Hz, J=5.3 Hz, 1H), 5.10 (s, 2H), 3.64-2.92 (m, 9H), 2.68-2.58 (m, 1H); ¹³C NMR (63 MHz, CDCl₃) δ 170.2 (C_(q)), 164.9 (C_(q)), 155.0 (C_(q)), 136.4 (C_(q)), 136.0 (C_(q)), 130.5 (CH), 129.6 (2CH), 128.8 (2CH), 128.7 (2CH), 128.3 (CH), 128.1 (2CH), 127.5 (CH), 127.3 (CH₂), 67.6 (CH₂), 49.9 (CH), 45.4 (CH₂), 43.3 (2CH₂), 41.8 (CH₂), 40.1 (CH₂); MS: m/z=444 [M+Na]⁺; HRMS: calcd. for C₂₄H₂₈₀₄N₃ 422.2074, found 422.2077 (0.6 ppm).

General Method for the acetylation Step (F)

Under inert atmosphere and at -78° C., the corresponding acetylation reagent, bromoacetyl bromide or chloroacetyl chloride, (1.65 mmol, 1.1 eq.) was slowly added to a solution of the corresponding amine (1.5 mmol, 1 eq.) and TEA (7.5 mmol, 5 eq.) in DCM (15 ml). The reaction mixture was stirred at −78° C. for 3 h, diluted with DCM (75 ml) and washed with hydrogen chloride (aq. soln. 0.2 M, 3×50 ml). The recovered organic layer was dried over magnesium sulfate and the solvent was evaporated under vacuum to give the crude product.

(a) benzyl 4-[2-[(2-bromoacetyl)amino]acetyl]perazine-1-carboxylate (6a)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₆H₂₀BrN₃O₄; yield 84%; white solid; m.p. 132-133° C.; M=398.25 g/mol; IR (ATR): v=3344 (w), 2904 (w), 1681 (s), 1621 (s), 1478 (m), 1423 (s), 1263 (m-s), 1223 (s), 750 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.51 (as, 1H), 7.38-7.32 (m, 5H), 5.15 (s, 2H), 4.08 (d, J=4.1 Hz, 2H), 3.89 (s, 2H), 3.70-3.62 (m, 2H), 3.57-3.48 (m, 4H), 3.46-3.32 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.1 (C_(q)), 165.8 (C_(q)), 155.1 (C_(q)), 136.3 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 67.8 (CH₂), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.0 (CH₂), 41.9 (CH₂), 28.6 (CH₂); MS: m/z=420 [M+Na]⁺ for ⁷⁹Br and 422 [M+Na] for ⁸¹Br; HRMS: calcd. for C₁₆H₂₁O₄N₃Br 398.0710, found 398.0713 (0.8 ppm).

(b) (4-methoxycarbonylphenyl)methyl 4-[2-[(2-bromoacetyl)amino]acetyl]perazine-1-carboxylate (6b)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₈H₂₂BrN₃O₆; yield 95%; light beige solid, m.p. 134-135° C.; M=456.29 g/mol; IR (ATR): v=3284 (m), 2898 (w), 1715 (m), 1697 (s), 1675 (m), 1642 (s), 1433 (m), 1278 (m), 1223 (s), 1102 (m), 1026 (m), 759 (s) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.04 (d, J=8.4 Hz, 2H), 7.51 (as, 1H), 7.41 (d, J=8.4 Hz, 2H), 5.20 (s, 2H), 4.09 (d, J=4.1 Hz, 2H), 3.92 (s, 3H), 3.90 (s, 2H), 3.68-3.62 (m, 2H), 3.59-3.52 (m, 4H), 3.46-3.36 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.2 (C_(q)), 165.9 (C_(q)), 154.9 (C_(q)), 141.3 (C_(q)), 130.2 (C_(q)), 130.1 (2CH), 127.8 (2CH), 67.0 (CH₂), 52.3 (CH₃), 44.3 (CH₂), 43.8 (CH₂), 43.7 (CH₂), 41.9 (2CH₂), 28.6 (CH₂); MS: m/z=480 [M+Na]⁺; HRMS: calcd. for C₁₈H₂₃O₆N₃Br 456.0765, found 456.0768 (0.7 ppm).

(c) 2-naphthylmethyl 4-[2-[(2-bromoacetyl)amino]acetyl]perazine-1-carboxylate (6c)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₂₀H₂₂BrN₃O₄; yield 77%; light beige solid; m.p. 133-134° C.; M=448.31 g/mol; IR (ATR): v=3338 (w), 2922 (w), 1687 (s), 1621 (s), 1478 (w), 1423 (s), 1217 (s), 826 (w), 765 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.87-7.83 (m, 4H), 7.52-7.45 (m, 4H), 5.31 (s, 2H), 4.08 (d, J=4.0 Hz, 2H), 3.90 (s, 2H), 3.66-3.40 (m, 8H); ¹³C NMR (63 MHz, CDCl₃) δ 166.1 (C_(q)), 165.8 (C_(q)), 155.2 (C_(q)), 133.7 (C_(q)), 133.3 (2C_(q)), 128.6 (CH), 128.1 (CH), 127.9 (CH), 127.5 (CH), 126.5 (CH), 126.5 (CH), 126.0 (CH), 68.0 (CH₂), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.0 (CH₂), 41.9 (CH₂), 28.6 (CH₂); MS: m/z=472 [M+Na]⁺; HRMS: calcd. for C₂₀H₂₃O₄N₃Br 448.0866, found 448.0867 (0.1 ppm).

(d) (6-methoxycarbonyl-2-naphthyl)methyl 4-[2-[(2-bromoacetyl)amino]acetyl]perazine-1-carboxylate (6d)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₂₂H₂₄BrN₃O₆; yield 80%; white solid; m.p. 136-137° C.; M=506.35 g/mol; IR (ATR): v=3326 (w), 2916 (w), 1706 (s), 1621 (s), 1423 (s), 1214 (m), 1202 (m), 814 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.61 (s, 1H), 8.08 (dd, J=8.6 Hz, J=1.6 Hz, 1H), 7.96 (d, J=8.5 Hz, 1H), 7.88 (d, J=8.7 Hz, 1H), 7.85 (s, 1H), 7.53 (dd, J=8.5 Hz, 1H), 7.53-7.47 (m, 1H), 5.33 (s, 2H), 4.09 (d, J=4.1 Hz, 2H), 3.98 (s, 3H), 3.90 (s, 2H), 3.69-3.65 (m, 2H), 3.60-3.54 (m, 4H), 3.43-3.36 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 166.1 (C_(q)), 165.9 (C_(q)), 155.1 (C_(q)), 136.4 (C_(q)), 135.5 (C_(q)), 132.3 (C_(q)), 130.9 (CH), 130.0 (CH), 128.4 (CH), 128.0 (C_(q)), 127.0 (CH), 126.6 (CH), 125.9 (CH), 67.6 (CH₂), 52.4 (CH₃), 44.3 (CH₂), 43.7 (CH₂), 43.7 (CH₂), 42.0 (CH₂), 41.9 (CH₂), 28.6 (CH₂); MS: m/z=528 [M+Na]⁺ for ⁷⁹Br and 530 [M+Na]⁻ for ⁸¹Br; HRMS: calcd. for C₂₂H₂₅O₆N₃Br 506.0921, found 506.0918 (0.6 ppm).

(e) 2-N-[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]-2-bromo-acetamide (6e)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₉H₂₈BrN₃O₃; yield 86%; white solid; m.p. 203-204° C.; M=426.35 g/mol; IR (ATR): v=3305 (m-s), 2932 (m-s), 1681 (s), 1645 (s), 1590 (s), 1563 (m), 1420 (s), 1223 (s), 1205 (m-s), 1014 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.50 (as, 1H), 4.09 (d, J=4.1 Hz, 2H), 3.90 (s, 2H), 3.74-3.70 (m, 4H), 3.66-3.63 (m, 2H), 3.43-3.39 (m, 2H), 2.06 (as, 3H), 1.99-1.97 (m, 6H), 1.79-1.67 (m, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 176.3 (C_(q)), 166.2 (C_(q)), 165.8 (C_(q)), 45.4 (CH₂), 44.8 (CH₂), 44.7 (CH₂), 42.4 (CH₂), 41.9 (CH₂), 41.9 (C_(q)), 39.2 (3CH₂), 36.7 (3CH₂), 28.6 (CH₂), 28.5 (3CH); MS: m/z=448 [M+Na]⁺ for ⁷⁹Br and 450 [M+Na] for ⁸¹Br; HRMS: calcd. for C₁₉H₂₉O₃N₃Br 426.1387, found 426.1389 (0.5 ppm).

(f) 1-adamantylmethyl 4-[2-[(2-bromoacetyl)amin]acetyl]perazine-1-carboxylate (6t)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₂₀H₃₀BrN₃O₄; yield 76%; light beige solid; m.p. 210-211° C.; M=456.37 g/mol; IR (ATR): v=3335 (w), 2898 (m-s), 2847 (w), 1678 (s), 1621 (s), 1466 (m), 1430 (m), 1247 (m), 1220 (s), 1205 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.52 (s, 1H), 4.09 (d, J=4.0 Hz, 2H), 3.90 (s, 2H), 3.71 (s, 2H), 3.68-3.64 (m, 2H), 3.56-3.50 (m, 4H), 3.45-3.41 (m, 2H), 1.99 (as, 3H), 1.76-1.61 (m, 6H), 1.53 (d, J=2.9 Hz, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 166.2 (C_(q)), 165.8 (C_(q)), 155.6 (C_(q)), 75.7 (CH₂), 44.4 (CH₂), 43.7 (CH₂), 43.5 (CH₂), 42.0 (CH₂), 42.0 (CH₂), 39.5 (3CH₂), 37.1 (3CH₂), 33.6 (C_(q)), 28.6 (CH₂), 28.1 (3CH); MS: m/z=480 [M+Na]⁺; HRMS: calcd. for C₂₀H₃₁O₄N₃Br 456.1492, found 456.1491 (0.3 ppm).

(g) 2-(1-adamantyl)ethyl 4-[2-[(2-bromoacetyl)amino]acetyl]perazine-1-carboxylate (6g)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₂₁H₃₂BrN₃O₄; yield 39%; light beige solid; m.p. 111-112° C.; M=470.40 g/mol; IR (ATR): v=3335 (w), 2895 (m-s), 2844 (m), 1700 (s), 1612 (s), 1427 (s), 1284 (w), 1226 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.51 (as, 1H), 4.16 (t, J=7.3 Hz, 2H), 4.09 (d, J=4.0 Hz, 2H), 3.90 (s, 2H), 3.66-3.59 (m, 2H), 3.57-3.45 (m, 4H), 3.41-3.34 (m, 2H), 1.95 (as, 3H), 1.73-1.59 (m, 6H), 1.52 (as, 6H), 1.43 (t, J=7.3 Hz, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 166.1 (C_(q)), 165.8 (C_(q)), 155.5 (C_(q)), 62.6 (CH₂), 44.4 (CH₂), 43.6 (CH₂), 43.5 (CH₂), 42.9 (CH₂), 42.7 (3CH₂), 42.1 (CH₂), 42.0 (CH₂), 37.1 (3CH₂), 31.9 (C_(q)), 28.7 (3CH), 28.6 (CH₂); MS: m/z=494 [M+Na]⁺; HRMS: calcd. for C₂₁H₃₃O₄N₃Br 470.1649, found 470.1646 (0.6 ppm).

(h) 22-bromo-N-[2-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]-2-oxo-ethyl]-acetamide (6h)

The crude compound obtained after the aqueous work-up (sodium bicarbonate satd. soln./DCM extraction) was triturated in diethyl ether to conduct to the desired derivative. C₂₀H₂₅BrN₄O₄S; yield 79%; yellow solid; m.p. 173-174° C.; M=497.41 g/mol; IR (ATR): v=3381 (w), 2925 (w), 1651 (s), 1451 (m), 1339 (m), 1144 (s), 941 (s), 792 (s), 707 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.64 (d, J=8.1 Hz, 1H), 8.38 (d, J=8.6 Hz, 1H), 8.21 (dd, J=7.4 Hz, J=1.2 Hz, 1H), 7.60-7.53 (m, 2H), 7.39 (as, 1H), 7.22 (d, J=7.4 Hz, 1H), 3.99 (d, J=4.1 Hz, 2H), 3.85 (s, 2H), 3.70-3.66 (m, 2H), 3.47-3.43 (m, 2H), 3.21 (dd, J=10.1 Hz, J=5.2 Hz, 4H), 2.92 (s, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 165.9 (C_(q)), 165.9 (C_(q)), 132.1 (C_(q)), 131.2 (CH), 131.0 (CH), 130.3 (C_(q)), 129.9 (C_(q)), 128.4 (CH), 123.5 (CH), 119.7 (CH), 115.7 (CH), 45.6 (2CH₃), 45.5 (CH₂), 45.3 (CH₂), 44.2 (CH₂), 41.7 (2CH₂), 28.5 (CH₂);

(i) benzyl 4-[(2R)-2-[(2-bromoacetyl)amino]propanoyl]piperazine-1-carboxylate (6i)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₇H₂₂BrN₃O₄; light beige solid; m.p. 104-105° C.; yield 78%; M=412.28 g/mol; IR (ATR): v=3302 (m), 2929 (w), 1700 (s), 1678 (s), 1615 (s), 1475 (m), 1427 (s), 1257 (m), 1226 (s), 1120 (m), 741 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.53 (d, J=6.9 Hz, 1H), 7.40-7.30 (m, 5H), 5.15 (s, 2H), 4.83 (p, J=6.9 Hz, 1H), 3.85 (ad, J=1.3 Hz, 2H), 3.70-3.35 (m, 8H), 1.35 (d, J=6.8 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 170.5 (C_(q)), 165.0 (C_(q)), 155.1 (C_(q)), 136.3 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 67.7 (CH₂), 46.1 (CH), 45.3 (CH₂), 43.9 (CH₂), 43.6 (CH₂), 42.1 (CH₂), 28.8 (CH₂), 18.9 (CH₃); MS: m/z=434 [M+Na] for ⁷⁹Br and 436 [M+Na]⁺ for ⁸¹Br; HRMS: calcd. for C₁₇H₂₃O₄N₃Br 412.0866, found 412.0870 (0.9 ppm).

(j) benzyl 4-[(2S)-2-[(2-bromoacetyl)amino]propanoyl]piperazine-1-carboxylate (6j)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₇H₂₂BrN₃o₄; light beige solid; m.p. 104-105° C.; yield 83%; M=412.28 g/mol; IR (ATR): v=3305 (m), 2929 (w), 1697 (s), 1675 (s), 1612 (s), 1484 (m), 1427 (s), 1254 (m), 1226 (s), 1120 (m), 741 (m) cm⁻¹;¹H NMR (250 MHz, CDCl₃) δ 7.55 (d, J=4.7 Hz, 1H), 7.47-7.28 (m, 5H), 5.14 (s, 2H), 4.92-4.74 (m, 1H), 3.85 (s, 2H), 3.79-3.33 (m, 8H), 1.34 (m, J=6.1 Hz, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 170.5 (C_(q)), 165.0 (C_(q)), 155.1 (C_(q)), 136.3 (C_(q)), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 67.7 (CH₂), 46.0 (CH), 45.3 (CH₂), 43.9 (CH₂), 43.6 (CH₂), 42.1 (CH₂), 28.8 (CH₂), 18.9 (CH₃); MS: m/z=434 [M+Na]⁺ for ⁷⁹Br and 436 [M+Na]⁺ for ⁸¹Br; HRMS: calcd. for C₁₇H₂₃O₄N₃Br 412.0866, found 412.0871 (1.1 ppm).

(k) benzyl 4-[(2R)-2-[(2-bromoacetyl)amino]-3-phenyl-propanoyl]perazine-1-carboxylate (6k)

The crude derivative obtained using the protocol described previously was subsequently used without any further purification. C₂₃H₂₆BrN₃O₄; colorless viscous oil; yield 85%; M=488.37 g/mol; IR (ATR): v=3293 (w), 3026 (w), 1694 (s), 1621 (s), 1420 (s), 1226 (s), 1120 (w), 750 (w), 732 (w), 695 (m-s) cm⁻¹;¹H NMR (250 MHz, CDCl₃) δ 7.46 (d, J=8.0 Hz, 1H), 7.41-7.17 (m, 10H), 5.14-5.05 (m, 3H), 3.85 (s, 2H), 3.66-3.39 (m, 3H), 3.34-3.15 (m, 3H), 3.11-2.88 (m, 3H), 2.70-2.60 (m, 1H); ¹³C NMR (63 MHz, CDCl₃) δ 169.8 (C_(q)), 165.5 (C_(q)), 155.0 (C_(q)), 136.3 (C_(q)), 135.6 (C_(q)), 129.7 (2CH), 128.9 (2CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.7 (CH), 67.7 (CH₂), 50.6 (CH), 45.5 (CH₂), 43.3 (2CH₂), 42.0 (CH₂), 39.9 (CH₂), 28.7 (CH₂); MS: m/z=510 [M+Na] for ⁷⁹Br and 512 [M+Na] for ⁸¹Br; HRMS: calcd. for C₂₃H₂₇O₄N₃Br 488.1179, found 488.1178 (0.3 ppm).

(l) benzyl 4-[(2S)-2-[(2-bromoacetyl)amino]-3-phenyl-propanoyl]piperazine-1-carboxylate (6l)

The crude derivative obtained using the general protocol described previously was subsequently used without any further purification. C₂₃H₂₆BrN₃O₄; colorless viscous oil; yield 98%; M=488.37 g/mol; IR (ATR): v=3274 (w), 3032 (w), 1697 (s), 1624 (s), 1427 (s), 1223 (s), 1117 (m), 750 (m), 695 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.17 (m, 11H), 5.14-5.05 (m, 3H), 3.85 (s, 2H), 3.62-3.40 (m, 3H), 3.34-3.18 (m, 3H), 3.11-2.88 (m, 3H), 2.72-2.62 (m, 1H); ¹³0 NMR (63 MHz, CDCl₃) δ 169.6 (C_(q)), 165.3 (C_(q)), 155.0 (C_(q)), 136.3 (C_(q)), 135.6 (C_(q)), 129.7 (2CH), 128.9 (2CH), 128.7 (2CH), 128.4 (CH), 128.2 (2CH), 127.6 (CH), 67.6 (CH₂), 50.6 (CH), 45.5 (CH₂), 43.3 (2CH₂), 42.0 (CH₂), 39.9 (CH₂), 28.7 (CH₂); MS: m/z=510 [M+Na]⁺ for ⁷⁹Br and 512 [M+Na]⁺ for ⁸¹Br; HRMS: calcd. for C₂₃H₂₇O₄N₃Br 488.1179, found 488.1178 (0.3 ppm).

(m) tert-butyl 4-[2-[(2-bromoacetyl)amino]acetyl]piperazine-1-carboxylate (6m)

The crude derivative obtained using the general protocol described previously was further triturated in diethyl ether to give the desired acetylated compound as a solid. C₁₃H₂₂BrN₃O₄; yield 42%; white solid; m.p. 148-149° C.; M=364.24 g/mol; IR (ATR): v=3323 (w), 2968 (w), 1687 (m), 1615 (s), 1405 (m), 1247 (m), 1223 (m), 1156 (s), 1123 (m), 1023 (m), 859 (w) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.52 (as, 1H), 4.09 (d, J=4.0 Hz, 2H), 3.90 (s, 2H), 3.65-3.61 (m, 2H), 3.49-3.42 (m, 4H), 3.40-3.36 (m, 2H), 1.47 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 166.1 (C_(q)), 165.8 (C_(q)), 154.5 (C_(q)), 80.7 (C_(q)), 44.4 (2CH₂), 42.1 (2CH₂), 41.9 (CH₂), 28.6 (CH₂), 28.5 (3CH₃); MS: m/z=386 [M+Na]⁺ for ⁷⁹Br and MS: m/z=388 [M+Na]⁺ for ⁸¹Br; HRMS: calcd. for C₁₃H₂₃O₄N₃Br 364.0866, found 364.0872 (1.5 ppm).

(n) (6-methoxycarbonyl-2-naphthyl)methyl 4-[2-[(2-chloroacetyl)amino]acetyl]piperazine-1-carboxylate (6n)

The crude derivative obtained using the general protocol described previously was further purified by flash chromatography (eluent: EtOAc). C₂₂H₂₄ClN₃O₆; yield 96%; white solid; m.p. 56-57° C.; M=461.90 g/mol; IR (ATR): v=2950 (w), 1697 (s), 1642 (s), 1430 (m-s), 1284 (m), 1223 (m-s), 753 (w) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.61 (s, 1H), 8.09 (dd, J=8.6 Hz, J=1.7 Hz, 1H), 7.96 (d, J=8.5 Hz, 1H), 7.88 (d, J=8.7 Hz, 1H), 7.85 (s, 1H), 7.60 (as, 1H), 7.53 (dd, J=8.5 Hz, J=1.6 Hz, 1H), 5.33 (s, 2H), 4.10 (d, J=4.2 Hz, 2H), 4.08 (s, 2H), 3.99 (s, 3H), 3.69-3.65 (m, 2H), 3.60-3.54 (m, 4H), 3.44-3.41 (m, 2H);¹³C NMR (63 MHz, CDCl₃) δ 167.2 (C_(q)), 166.3 (C_(q)), 166.1 (C_(q)), 155.1 (C_(q)), 136.4 (C_(q)), 135.4 (C_(q)), 132.3 (C_(q)), 130.9 (CH), 130.0 (CH), 128.4 (CH), 128.0 (C_(q)), 127.0 (CH), 126.6 (CH), 125.9 (CH), 67.6 (CH₂), 52.4 (CH₃), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.5 (CH₂), 42.0 (CH₂), 41.6 (CH₂); MS: m/z=484 [M+Na]⁺; HRMS: calcd. for C₂₂H₂₄O₆N₃ClNa 484.1246, found 484.1246 (0.0 ppm).

(o) N-[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]-2-chloro-acetamide (6o)

The crude material obtained following the general procedure was purified by flash chromatography using ethyl acetate as eluent. C₁₉H₂₈ClN₃O₃; yield 36%; white solid; m.p. 201-202° C.; M=381.90 g/mol; IR (ATR): v=3305 (m), 2904 (m), 1687 (s), 1648 (s), 1599 (s), 1560 (m), 1451 (m), 1414 (m-s), 1223 (s), 1011 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.60 (as, 1H), 4.11 (d, J=4.2 Hz, 2H), 4.08 (s, 2H), 3.74-3.70 (m, 4H), 3.67-3.63 (m, 2H), 3.43-3.39 (m, 2H), 2.06 (as, 3H), 1.99 (d, J=2.6 Hz, 6H), 1.79-1.68 (m, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 176.3 (C_(q)), 166.3 (C_(q)), 166.2 (C_(q)), 45.4 (CH₂), 44.8 (CH₂), 44.7 (CH₂), 42.5 (CH₂), 42.4 (CH₂), 41.9 (C_(q)), 41.6 (CH₂), 39.2 (3CH₂), 36.7 (3CH₂), 28.5 (3CH); MS: m/z=404 [M+Na]⁺; HRMS: calcd. for C₁₉H₂₉O₃N₃C₁ 382.1892, found 382.1896 (1.1 ppm).

(p) 2-chloro-N-[2-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]-2-oxo-ethyl]-acetamide (6p)

The crude material obtained following the general protocol mentioned above was further purified by flash-chromatography (eluent: AcOEt) to conduct to the titled compound. C₂₀H₂₅ClN₄O₄S; yield 80%; yellow-green solid; m.p. 68-69° C.; M=452.95 g/mol; IR (ATR): v=3314 (w), 2938 (w), 1648 (s), 1454 (m), 1436 (m), 1141 (s), 938 (m-s), 786 (s) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.59 (d, J=8.5 Hz, 1H), 8.35 (d, J=8.7 Hz, J=1H), 8.20 (dd, J=7.4 Hz, J=1.3 Hz, 1H), 7.56 (d, J=7.4 Hz, 1H), 7.53 (d, J=7.5 Hz, 1H), 7.49 (as, 1H), 7.19 (d, J=7.5 Hz, 1H), 4.02 (s, 2H), 4.00 (d, J=4.2 Hz, 2H), 3.70-3.66 (m, 2H), 3.47-3.43 (m, 2H), 3.24-3.18 (m, 4H), 2.89 (s, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 166.2 (C_(q)), 165.9 (C_(q)), 152.1 (C_(q)), 132.1 (C_(q)), 131.4 (CH), 131.0 (CH), 130.4 (C_(q)), 130.2 (C_(q)), 128.5 (CH), 123.3 (CH), 119.3 (CH), 115.6 (CH), 45.5 (2CH₃), 45.5 (CH₂), 45.4 (CH₂), 44.3 (CH₂), 42.4 (CH₂), 41.8 (CH₂),41.4 (CH₂); MS: m/z=475 [M+Na]⁺; HRMS: calcd. for C₂₀H₂₆O₄N₄SCl 453.1358, found 453.1358 (0.0 ppm).

(q) tert-butyl 4-(2-bromoacetyl)piperazine-1-carboxylate (6q)

Under inert atmosphere and at -78° C., bromoacetyl bromide (53.7 mmol, 1 eq.) was slowly added to a solution of Boc-piperazine (53.7 mmol, 1 eq.) and TEA (59.1 mmol, 1.1 eq.) in DCM (150 ml). The reaction mixture was stirred at -78° C. for 3 h, diluted with DCM (75 ml) and washed with water. The recovered organic layer was dried over magnesium sulfate and the solvent was evaporated under vacuum. The obtained crude product was further triturated with diethyl ether, filtered and dried under vacuum to conduct to the desired acetylated compound. C₁₁H₁₉BrN₂O₃; yield 78%; white solid; m.p. 243-244° C.; M=307.18 g/mol; IR (KBr): v=2965 (m), 1689 (s), 1632 (s), 1417 (s), 1246 (s), 1167 (s), 1023 (m); cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 3.87 (s, 2H), 3.61-3.57 (m, 2H), 3.55-3.47 (m, 4H), 3.46-3.41 (m, 2H), 1.46 (s, 9H); ¹³C NMR (63 MHz, CDCl₃) δ 165.5 (C_(q)), 154.5 (C_(q)), 80.5 (C_(q)), 46.6 (2CH₂), 40.9 (2CH₂), 28.4 (3CH₃), 25.7 (CH₂);

(r) benzyl 4-(2-acetamidoacetyl)piperazine-1-carboxylate (6r)

Under inert atmosphere and at -78° C., acetyl bromide (1.1 eq.) was slowly added to a solution of the corresponding amine (0.36 mmol, 1 eq.) and TEA (1.5 eq.) in DCM (5 ml). The reaction mixture was stirred at -78° C. for 2 h, diluted with DCM (50 ml) and subsequently washed with hydrogen chloride (aq. soln. 0.1 M, 3×50 ml). The recovered organic layer was dried over magnesium sulfate and the solvent was evaporated under vacuum to give the crude product further triturated in diethyl ether to conduct to the desired acetylated derivative. C₁₆H₂₁N₃O₄; yield 90%; white solid; m.p. 134-135° C.; M=319.36 g/mol; IR (ATR): v=3356 (m), 2919 (s), 1681 (m), 1657 (s), 1636 (s), 1563 (m), 1420 (m), 1229 (s), 1120 (m), 1068 (m), 1023 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.39-7.33 (m, 5H), 6.56 (as, 1H), 5.15 (s, 2H), 4.06 (d, J=3.8 Hz, 2H), 3.64-3.59 (m, 2H), 3.56-3.50 (m, 4H), 3.45-3.40 (m, 2H), 2.05 (s, 3H); ¹³C NMR (63 MHz, CDCl₃) δ 170.3 (C_(q)), 166.9 (C_(q)), 155.2 (C_(q)), 136.4 (C_(q)), 128.8 (2CH), 128.5 (CH), 128.3 (2CH), 67.8 (CH₂), 44.3 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 41.9 (CH₂), 41.5 (CH₂), 23.2 (CH₃); MS: m/z=342 [M+Na]; HRMS: calcd. for C₁₆H₂₂o₄N₃ 320.1605, found 320.1608 (1.0 ppm).

Preparation of the dimethylsulfonium Salts (G)

Dimethyl sulfide (2.5 mmol, 10 eq.) was added to a solution of the previously obtained bromo-acetylated compounds (0.25 mmol, 1 eq.) in methanol (5 ml). The reaction vessel was sealed and the mixture vigorously stirred for 48 h at room temperature. The solvent was evaporated, the residue was dissolved in water (15 ml) and washed with ethyl acetate (3×20 ml). The recovered aqueous layer was freeze-dried to give the final dimethylsulfonium bromide salts as solids.

(a) [2-[[2-(4-benzyloxycarbonylpiperazin-1-yl)-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7a)

C₁₈H₂₆BrN₃O₄S; yield 83%; white solid/hygroscopic; M=460.39 g/mol; IR (ATR): v=2919 (w), 1681 (s), 1642 (s), 1427 (m), 1223 (s), 1123 (w), 1020 (w), 762 (w), 695 (w) cm⁻¹; ¹H NMR (250 MHz, DMSO₃) δ 7.38-7.32 (m, 5H), 5.10 (s, 2H), 4.47 (s, 2H), 4.08 (d, J=5.4 Hz, 2H), 3.53-3.40 (m, 8H), 2.94 (s, 6H); ¹³C NMR (63 MHz, DMSO₃) δ 166.2 (C_(q)), 163.2 (C_(q)), 154.4 (C_(q)), 136.7 (C_(q)), 128.4 (2CH), 127.9 (CH), 127.6 (2CH), 66.4 (CH₂), 46.4 (CH₂), 43.7 (CH₂), 43.4 (CH₂), 43.1 (CH₂), 41.1 (CH₂), 41.0 (CH₂), 24.5 (2CH₃); MS: m/z=380 [M−Br]⁺; HRMS: calcd. for C₁₈H₂₆O₄N₃S 380.1639, found 380.1638 (0.1 ppm).

(b) [2-[[2-[4-[(4-methoxycarbonylphenyl)methoxycarbonyl]piperazin-1-yl]-2-oxo-ethyl]-amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7b)

C₂₀H₂₈BrN₃O₆S; yield 94%; light beige solid/hygroscopic; M=518.42 g/mol; IR (ATR): v=3211 (w), 2913 (w), 1694 (s), 1645 (s), 1423 (m-s), 1407 (m), 1278 (m-s), 1220 (m-s), 1102 (m), 1017 (m), 753 (m) cm ⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.90 (t, J=5.4 Hz, 1H), 7.96 (d, J=8.4 Hz, 2H), 7.51 (d, J=8.4 Hz, 2H), 5.19 (s, 2H), 4.48 (s, 2H), 4.09 (d, J=5.4 Hz, 2H), 3.85 (s, 3H), 3.86-3.38 (m, 8H), 2.94 (s, 6H); ¹³C NMR (63 MHz, DMSO) δ 166.3 (C_(q)), 166.0 (C_(q)), 163.2 (C_(q)), 154.2 (C_(q)), 142.3 (C_(q)), 129.3 (2CH), 129.0 (C_(q)), 127.4 (2CH), 65.7 (CH₂), 52.2. (CH₃), 46.4 (CH₂), 43.7 (CH₂), 43.4 (CH₂), 43.2 (CH₂), 41.1 (CH₂), 41.0 (CH₂), 24.5 (2CH₃); MS: m/z=438 [M+]⁺; HRMS: calcd. for C₂₀H₂₈O₆N₃S 438.1693, found 438.1693 (0.1 ppm).

(c) dimethyl-[2-[[2-[4-(2-naphthylmethoxycarbonyl)piperazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]sulfonium bromide (7c)

C₂₂H₂₈BrN₃O₄S; yield 47%; light beige solid/hydroscopic; M=510.44 g/mol; IR (ATR): v=2910 (w), 1678 (s), 1639 (s), 1463 (m), 1427 (s), 1223 (s), 817 (w), 747 (m) cm⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 8.88 (t, J=4.9 Hz, 1H), 7.86-7.80 (m, 4H), 7.51-7.43 (m, 3H), 5.29 (s, 2H), 5.05 (s, 2H), 4.12 (d, J=5.3 Hz, 2H), 3.61-3.41 (m, 8H), 3.32 (s, 6H); ¹³C NMR (63 MHz, CDCl₃) δ 166.3 (C_(q)), 163.3 (C_(q)), 154.5 (C_(q)), 134.3 (C_(q)), 132.7 (C_(q)), 132.6 (C_(q)), 128.1 (CH), 127.8 (CH), 127.6 (CH), 126.5 (CH), 126.4 (CH), 126.3 (CH), 125.8 (CH), 66.6 (CH₂), 46.5 (CH₂), 43.8 (CH₂), 43.4 (CH₂), 43.2 (CH₂), 41.2 (CH₂), 41.1 (CH₂), 24.6 (2CH₃); MS: m/z=430 [M-Br]⁺; HRMS: calcd. for C₂₂H₂₈O₄N₃S 430.1795, found 430.1793 (0.5 ppm).

(d) [2-[[2-[4-[(6-methoxycarbonyl-2-naphthyl)methoxycarbonyl]perazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7d)

C₂₄H₃₀BrN₃O₆S; yield 81%; white solid; m.p. 125-126° C.; M=568.48 g/mol; IR (ATR): v=3320 (w), 2980 (w), 1712 (m), 1675 (m), 1639 (s), 1433 (m), 1287 (m), 1232 (s), 1199 (m), 1126 (m), 759 (w) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.88 (t, J=5.4 Hz, 1H), 8.65 (s, 1H), 8.16 (d, J=8.6 Hz, 1H), 8.08-7.99 (m, 3H), 7.62 (dd, J=8.5 Hz, J=1.6 Hz, 1H), 5.30 (s, 2H), 4.43 (s, 2H), 4.10 (d, J=5.4 Hz, 2H), 3.92 (s, 3H), 3.56-3.40 (m, 8H), 2.91 (s, 6H); ¹³C NMR (63 MHz, DMSO) δ 166.3 (C_(q)), 166.3 (C_(q)), 163.2 (C_(q)), 154.3 (C_(q)), 137.3 (C_(q)), 134.9 (C_(q)), 131.6 (C_(q)), 130.4 (CH), 129.7 (CH), 128.5 (CH), 127.1 (C_(q)), 126.5 (CH), 125.9 (CH), 125.2 (CH), 66.3 (CH₂), 52.3 (CH₃), 46.5 (CH₂), 43.7 (CH₂), 43.4 (CH₂), 43.3 (CH₂), 41.1 (CH₂), 41.1 (CH₂), 24.6 (2CH₃). MS: m/z=488 [M]⁺; HRMS: calcd. for C₂₄H₃₀O₆N₃S 488.1850, found 488.1841 (1.8 ppm).

(e) [2-[[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7e)

C₂₁H₃₄BrN₃O₃S; yield 98%; white solid; m.p. 157-158° C.; M=488.48 g/mol; IR (ATR): v=3417 (w), 2901 (m-s), 2844 (w), 1645 (s), 1612 (s), 1445 (w), 1408 (m), 1241 (m), 1214 (m), 1008 (s) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.87 (t, J=5.3 Hz, 1H), 4.42 (s, 2H), 4.08 (d, J=5.3 Hz, 2H), 3.65-3.54 (m, 4H), 3.48-3.38 (m, 4H), 2.90 (s, 6H), 1.98 (as, 3H), 1.92-1.86 (m, 6H), 1.74-1.62 (m, 6H);¹³C NMR (63 MHz, DMSO) δ 174.6 (C_(q)), 166.2 (C_(q)), 163.2 (C_(q)), 46.5 (CH₂), 44.5 (2CH₂), 44.2 (CH₂), 41.7 (CH₂), 41.0 (CH₂), 40.9 (C_(q)), 38.4 (3CH₂), 36.0 (3CH₂), 27.9 (3CH), 24.6 (2CH₃); MS: m/z=408 [M-Br]⁺; HRMS: calcd. for C₂₁H₃₄O₃N₃S 408.2315, found 408.2317 (0.4 ppm).

(f) [2-[[2-[4-(1-adamantylmethoxycarbonyl)piperazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7f)

C₂₂H₃₆BrN₃O₄S; yield 67%; light beige solid/hygroscopic; M=518.51 g/mol; IR (ATR): v=3414 (w), 2895 (s), 2844 (m), 1669 (s), 1642 (s), 1466 (m), 1423 (m-s), 1220 (s) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.89 (t, J=5.3 Hz, 1H), 4.46 (s, 2H), 4.08 (d, J=5.4 Hz, 2H), 3.62 (s, 2H), 3.54-3.40 (m, 8H), 2.93 (s, 6H), 1.94 (as, 3H), 1.71-1.58 (m, 6H), 1.50 (as, 6H); ¹³C NMR (63 MHz, DMSO) δ 166.3 (C_(q)), 163.2 (C_(q)), 154.8 (C_(q)), 74.3 (CH₂), 46.4 (CH₂), 43.7 (CH₂), 43.3 (CH₂), 43.0 (CH₂), 41.1 (CH₂), 41.0 (CH₂), 38.7 (3CH₂), 36.4 (3CH₂), 33.1 (C_(q)), 27.4 (3CH), 24.6 (2CH₃); MS: m/z=438 [M-Br]⁺; HRMS: calcd. for C₂₂H₃₆O₄N₃S 438.2421, found 438.2419 (0.5 ppm).

(g) [2-[[2-[4-[2-(1-adamantyl)ethoxycarbonyl]piperazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7g)

C₂₃H₃₈BrN₃O₄S; yield 75%; light beige solid/hygroscopic; M=532.53 g/mol; IR (ATR): v=2895 (m-s), 2847 (w), 1684 (s), 1423 (s), 1226 (s), 1020 (w) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.89 (t, J=5.3 Hz, 1H), 4.47 (s, 2H), 4.09-4.03 (m, 4H), 3.50-3.38 (m, 8H), 2.93 (s, 6H), 1.91 (as, 3H), 1.69-1.57 (m, 6H), 1.49 (as, 6H), 1.37 (t, J=7.3, 2H); ¹³C NMR (63 MHz, DMSO) δ 166.2 (C_(q)), 163.2 (C_(q)), 154.6 (C_(q)), 61.2 (CH₂), 46.4 (CH₂), 43.7 (CH₂), 43.3 (CH₂), 43.0 (CH₂), 42.4 (CH₂), 41.9 (3CH₂), 41.1 (CH₂), 41.0 (CH₂), 36.5 (3CH₂), 31.3 (C_(q)), 27.9 (3CH), 24.6 (2CH₃); MS: m/z=452 [M−Br]⁺; HRMS: calcd. for C₂₃H₃₈O₄N₃S 452.2578, found 452.2575 (0.6 ppm).

(h) [2-[[2-[4-[[5-(dimethylamino)-1-naphthyl]sulfonyl]piperazin-1-yl]-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7h)

C₂₂H₃₁BrN₄O₄S2; yield 76%; light yellow solid; m.p. 98-99° C.; M=559.54 g/mol; IR (ATR): v=3475 (m), 2992 (w), 1672 (s), 1648 (s), 1345 (s), 1153 (s), 1144 (s), 935 (s), 795 (s), 713 (s) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.79 (t, J=5.4 Hz, 1H), 8.54 (d, J=8.5 Hz, 1H), 8.30 (d, J=8.7 Hz, 1H), 8.14 (dd, J=7.4 Hz, J=1.1 Hz, 1H), 7.68 (dd, J=8.5 Hz, J=7.4 Hz, 1H), 7.63 (dd, J=8.5 Hz, J=7.7 Hz, 1H), 7.28 (d, J=7.3 Hz, 1H), 4.38 (s, 2H), 4.01 (d, J=5.3 Hz, 2H), 3.55-3.43 (m, 4H), 3.18-3.05 (m, 4H), 2.87 (s, 6H), 2.83 (s, 6H); ¹³C NMR (63 MHz, DMSO) δ 166.2 (C_(q)), 163.2 (C_(q)), 151.5 (C_(q)), 132.4 (C_(q)), 130.5 (CH), 130.2 (CH), 129.6 (C_(q)), 129.2 (C_(q)), 128.3 (CH), 123.8 (CH), 118.9 (CH), 115.4 (CH), 46.5 (CH₂), 45.3 (CH₂), 45.2 (CH₂), 45.1 (2CH₃), 43.7 (CH₂), 41.0 (CH₂), 40.9 (CH₂), 24.5 (2CH₃); MS: m/z=479 [M]⁺; HRMS: calcd. for C₂₂H₃₁O₄N₄S₂ 479.1781, found 479.1779 (0.5 ppm).

(i) [2-[[(1S)-2-(4-benzyloxycarbonylpiperazin-1-yl)-1-methyl-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7j)

C₁₉H₂₈BrN₃O₄S; light beige solid/hygroscopic; yield 78%; M=474.41 g/mol; IR (ATR): v=2986 (w), 1694 (s), 1636 (s), 1420 (s), 1220 (s), 1020 (m), 759 (m), 698 (m) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 9.07 (d, J=7.3 Hz, 1H), 7.39-7.32 (m, 5H), 5.10 (s, 2H), 4.78 (p, J=6.6 Hz, 1H), 4.40 (s, 2H), 3.51-3.46 (m, 8H), 2.90 (s, 3H), 2.89 (s, 3H), 1.21 (d, J=6.9 Hz, 3H); ¹³C NMR (63 MHz, DMSO) δ 169.8 (C_(q)), 162.4 (C_(q)), 154.4 (C_(q)), 136.7 (C_(q)), 128.4 (2CH), 127.9 (CH), 127.7 (2CH), 66.4 (CH₂), 46.6 (CH₂), 45.3 (CH), 44.5 (CH₂), 43.6 (CH₂), 43.2 (CH₂), 41.3 (CH₂), 24.7 (CH₃), 24.6 (CH₃), 17.6 (CH₃); MS: m/z=394 [M−Br]⁺; HRMS: calcd. for C₁₉H₂₈O₄N₃S 394.1795, found 394.1800 (1.3 ppm).

(j) [2-[[2-(4-tert-butoxycarbonylpiperazin-1-yl)-2-oxo-ethyl]amino]-2-oxo-ethyl]-dimethyl-sulfonium bromide (7m)

C₁₅H₂₈BrN₃O₀₄S; light yellow solid/hygroscopic; yield 48%; M=426.37 g/mol; IR (ATR): v=3429 (w), 2974 (w), 1672 (s), 1645 (s), 1408 (s), 1460 (w), 1363 (m), 1232 (m), 1163 (m-s), 1107 (w) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.87 (t, J=5.4 Hz, 1H), 4.43 (s, 2H), 4.08 (d, J=5.4 Hz, 2H), 3.45-3.32 (m, 8H), 2.91 (s, 6H), 1.41 (s, 9H); ¹³0 NMR (63 MHz, DMSO) δ 166.2 (C_(q)), 163.2 (C_(q)), 153.8 (C_(q)), 79.2 (C_(q)), 46.5 (2CH₂), 43.8 (CH₂), 41.2 (CH₂), 41.0 (2CH₂), 28.0 (3CH₃), 24.6 (2CH₃); MS: m/z=346 [M]⁺; HRMS: calcd. for C₁5H₂₈O₄N₃S 346.1795, found 346.1797 (0.6 ppm).

(k) benzyl 4-[2-[[2-(1,3,4,5-tetramethylimidazol-1-ium-2-yl)sulfanylacetyl]amino]-acetyl]-piperazine-1-carboxylate bromide (7s)

C₂₃H₃₂BrN₅O₄S; light beige solid/hygroscopic; yield 79%; M=554.50 g/mol; IR (ATR): v=3402 (w), 3192 (w), 2922 (w), 1696 (s), 1645 (s), 1423 (s), 1226 (s), 1026 (w) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 8.35 (t, J=5.3 Hz, 1H),7.38-7.32 (m, 5H), 5.10 (s, 2H), 3.96 (d, J=5.4 Hz, 2H), 3.77 (s, 6H), 3.68 (s, 2H), 3.50-3.39 (m, 8H), 2.29 (s, 6H); ¹³C NMR (63 MHz, DMSO) δ 167.0 (C_(q)), 166.6 (C_(q)), 154.4 (C_(q)), 136.7 (C_(q)), 135.9 (C_(q)), 129.2 (C_(q)), 128.4 (2CH), 127.9 (CH), 127.6 (2CH), 66.4 (CH₂), 43.7 (CH₂), 43.3 (CH₂), 43.1 (CH₂), 41.0 (CH₂), 40.7 (CH₂), 36.8 (CH₂), 33.5 (2CH₃), 8.8 (2CH₃); MS: m/z=474 [M]⁺; HRMS: calcd. for C₂₃H₃₂O₄N₅S 474.2170, found 474.2161 (1.8 ppm).

General Method for the Preparation of vinyl sulfonamides (H)

Under inert atmosphere, triethylamine (1.1 eq.) was added at -60° C. to a solution of 2-chloroethyl-sulfonyl chloride (0.3 mmol, 1 eq.) in DCM (6 mL). The mixture was stirred at −60° C. for 2 h before adding the corresponding amine (1.1 eq.) and triethylamine (1.1 eq.), then the reaction was stirred for two additional hours at 0° C. The reaction was quenched by addition of HCl (aq. soln., 0.1 N, 20 mL) and extracted with DCM (3×20 mL). The recovered organic layers were dried over magnesium sulfate and the solvent evaporated under reduced pressure. The crude material was further purified by flash-chromatography (eluent: ethyle acetate) to conduct to the desired vinyl sulfonamide.

(a) benzyl 4-[2-(vinylsulfonylamino)acetyl]piperazine-1-carboxylate (8a)

C₁₆H₂₁N₃O₅S; yield 53%; colorless viscous oil becoming whitish solid on standing; m.p. 66-67° C.; M=367.42 g/mol; IR (ATR): v=3220 (w), 2865 (w), 1694 (s), 1648 (s), 1423 (m), 1326 (w), 1223 (s), 1141 (m), 1123 (m), 762 (m), 729 (m), 695 (m) cm ⁻¹; ¹H NMR (250 MHz, CDCl₃) δ 7.41-7.30 (m, 5H), 6.51 (dd, J=16.5 Hz, J=9.8 Hz, 1H), 6.25 (d, J=16.5 Hz, 1H), 5.95 (d, J=9.8 Hz, 1H), 5.44 (t, J=4.2 Hz, 1H), 5.15 (s, 2H), 3.84 (d, J=4.4 Hz, 2H), 3.68-3.62 (m, 2H), 3.57-3.50 (m, 4H), 3.41-3.28 (m, 2H); ¹³C NMR (63 MHz, CDCl₃) δ 165.9 (C_(q)), 155.1 (C_(q)), 136.3 (C_(q)), 135.5 (CH), 128.8 (2CH), 128.5 (CH), 128.3 (2CH), 127.2 (CH₂), 67.8 (CH₂), 44.3 (CH₂), 43.9 (CH₂), 43.7 (CH₂), 43.6 (CH₂), 42.2 (CH₂); MS: m/z=390 [M+Na]⁺; HRMS: calcd. for C₁₆H₂₂O₅N₃S 368.1275, found 368.1280 (1.4 ppm).

(b) N-[2-[4-(adamantane-1-carbonyl)piperazin-1-yl]-2-oxo-ethyl]ethenesulfonamide (8e)

C₁₉H₂₉N₃O₄S; yield 49%; white solid; m.p. 159-160° C.; M=395.52 g/mol; IR (ATR): v=3232 (w), 2895 (m), 2850 (w), 1645 (m-s), 1612 (m-s), 1402 (m-s), 1320 (m), 1232 (m-s), 1153 (s), 1011 (m-s), 984 (m), 738 (m) cm⁻¹; ¹H NMR (250 MHz, DMSO) δ 7.35 (t, J=5.5 Hz, 1H), 6.71 (dd, J=16.6 Hz, J=10.0 Hz, 1H), 6.03 (d, J=16.6 Hz, 1H), 5.94 (d, J=10.0 Hz, 1H), 3.82 (d, J=5.6 Hz, 2H), 3.57-3.46 (m, 4H), 3.42-3.38 (m, 4H), 1.97 (as, 3H), 1.89 (s, 6H), 1.73-1.62 (m, 6H); ¹³C NMR (63 MHz, DMSO) δ 174.6 (C_(q)), 166.4 (C_(q)), 137.0 (CH), 125.1 (CH₂), 44.5 (2CH₂), 44.3 (CH₂), 43.7 (CH₂), 41.7 (CH₂), 40.9 (C_(q)), 38.4 (3CH₂), 36.0 (3CH₂), 27.9 (3CH); HRMS: calcd. for C₁₉H₃₀O₄N₃S 396.1952, found 396.1954 (0.6 ppm).

Example 2 Inhibition of Tissue Transglutaminase (TG2) Activity

Methodology

TG transamidation activity and the affect of inhibitors on activity was measured by biotin X-cadaverine incorporation into N,N′-dimethylcasein. After coating 96 well plates with 100 μl of 10 mg/ml N,N′-dimethylcasein in 50 mM Tris-Cl, pH8 at 4° C. over night, plates were washed with TBS-0.05% Tween-20(v/v), pH 7.6 and TBS, pH 7.6, and 100 μl purified recombinant human TG2 (400 ng/ml Zedira, Germany) (tissue transglutaminase) in 50 mM Tris-HCl, pH7.4, containing 1 mM DTT, 10 mM CaCl₂ and 0.1 μM biotin-cadaverine added into the coated wells containing the appropriate concentration of inhibitor. The reaction was allowed to proceed for 2 h at 37° C.The plate was then washed twice with TBS-Tween-20 (v/v), pH 7.6 and once with TBS, pH 7.6 before being blocked with 100 μl of blocking buffer (3% (w/v) BSA in TBS-Tween, pH 7.6) for 30 min at 37° C. After blocking, the wells were incubated with 100 μl HRP-conjugated Extr-Avidin peroxidase (Sigma-Aldrich, UK) in blocking buffer (1:1,000 dilution) for 1 h at 37° C. After another set of washes, TG2 activity was measured using Sigma Fast OPD, tablets dissolved in 20 ml of distilled H₂O. The colour was developed by adding 2.5 M H₂SO₄ and the absorbance at 490 nm measured using a microplate reader ELx808™. All inhibitors were dissolved in DMSO as a 100 mM solution prior to addition to the assay.

For determination of the activity of transglutaminase 1,transglutaminase 3 and Factor X111 a, a commercial microassay was used, TG-CovTest (Covalab, Lyon, France; see also Perez et al. Anal Biochem. 2009; 389:150-156).

Results

The results of the tissue transglutaminase IC50 assay are shown in Tables 1, 2, 3 and 4.

TABLE 1 Compound  

IC50 for TG2 Ref R′ R″ (μM) code

0.75 ± 0.07 EB 1-32

1.4 ± 0.5 EB 1-33

100 EB 1-34

4.25 ± 0.78 EB 1-44

5.925 ± 0.11  EB 1-50

1.85 ± 0   EB 2-13

0.008 ± 0.003 EB 1-37

0.070 ± 0.007 EB 1-46

400 EB 1-45

0.029 ± 0.019 EB 1-87

1.07 ± 0.1  EB 1-91

 0.44 ± 0.057 EB 1-81

0.015 ± 0.007 EB 1-137

1.5 ± 0.4 EB 1-138

2.1 ± 0   EB 1-136

 0.0067 ± 0.00021 EB 2-58

3.3 ± 0.3 EB 1-128 (EB 2-28)

6.3 ± 2.9 EB 1-123

0.0021 ± 0.0002 EB 1-111

<1 EB 1-176

0.775 ± 0.035 EB 1-178

1.625 ± 0.035 EB 1-180

 0.0063 ± 0.00049 EB 1-177

3.15 ± 0.92 EB 2-30

 0.9 ± 0.14 EB 1-181

0.0039 ± 0.0004 EB 2-17

 0.0088 ± 0.00035 EB 2-54

0.89 ± 0.2  EB 2-18

0.125 ± 0.066 EB 2-16

TABLE 2 Compound  

IC50 for TG2 Ref R′ R″ (μM) code

1.725 ± 0.11  EB 2-35

 0.88 ± 0.035 EB 2-32

TABLE 3 Compound  

IC50 for TG2 Ref R′ R″ (μM) code

 0.0061 ± 0.00042 EB 1-155

  038 ± 0.057 EB 1-159

 0.0059 ± 0.00014 EB 2-57 

TABLE 4

Aa IC50 for TG2 Ref (amino acid side chain) R2 (μM) code D-Ala

0.066 ± 0.001 EB 1-100

6.8 ± 2.0 EB 1-106

>100 EB 1-104 L-Ala

0.048 ± 0.006 EB 1-101

0.7 ± 0.3 EB 1-107

>100 EB 1-105 D-Phe

>100 EB 1-127

>100 EB 1-131 L-Phe

>100 EB 1-126

>100 EB 1-130

Further testing of the effects of exemplary compounds on the activity of other transglutaminases (TG1, TG3 and Factors X111 a) revealed a selective inhibition of tissue transglutaminase (TG2), as shown in Table 5.

TABLE 5 Compound ref code Estimated IC50 (See Tables 1 to 3) TG1 TG3 FXIII EB 1-33 >100 μM >100 μM >100 μM EB 1-91 >100 μM >100 μM >100 μM EB 1-81 >100 μM >100 μM >100 μM EB 1-137    5 μM  65 μM <100 μM EB -138 >100 μM <100 μM <100 μM EB 2-28 >100 μM >100 μM  100 μM EB 1-176    2 μM  25 μM >100 μM EB 1-178 >100 μM >100 μM >100 μM EB 1-180  100 μM >100 μM >100 μM EB 2-17    1 μM  70 μM <100 μM EB 1-136 >100 μM >100 μM >100 μM EB 2-18 >100 μM >100 μM >100 μM EB 2-16    2 μM  11 μM  30 μM EB 1-155    5 μM >100 μM >100 μM EB 1-159 >100 μM >100 μM >100 μM EB 1-46 >100 μM >100 μM >100 μM EB 1-181  100 μM >100 μM >100 μM EB 1-177    3 μM  50 μM >100 μM

EXAMPLE 3 Cell Permeability

This study shows that different inhibitors, depending on the chemistry of the R₃ group, show different cell permeabilities.

Methods

HUVEC cells, which have high TG2 expression (A novel extracellular role for tissue transglutaminase in matrix-bound VEGF-mediated angiogenesis. Z. Wang, et al, M. Griffin (2013) Cell Death and Disease. Z. Wang Z, et al, M. Griffin. Cell Death Dis. 4:e808), were grown in the complete endothelial growth medium EGM. The assay is based on the intracellular activation of TG2 using ionomycin to raise intracellular Ca²⁺ levels and quantifying the intracellular incorporation of biotin cadaverine in the presence and absence of inhibitor. To induce the intracellular TG2 activity, the cells were incubated with fresh growth media with 0.5% FBS containing given 1 μM ionomycin and 1 mM biotin-cadaverine in the presence or absence of 50 uM of TG2 inhibitors. The inhibitors EB 1-155, 1-159, 1-178, 1-180, 2-16 and 2-18 were used in this protocol (see Example 2 above for compound structures). The non-cell permeable inhibitor R₂₈₁ and cell permeable inhibitor R283 were used as the negative and positive controls, respectively. Intracellular activity was normalised to R281. After a 3 h incubation, the cells were collected in media, pelleted, washed once with PBS and resuspended in homogenization buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA), sonicated on ice. The cell membrane was pelleted at 18,000×g for 15 min and the supernatant (the cytosol fraction) was used for the assay. 50 μg of total protein in 100 μl of the homogenization buffer was loaded to the high protein binding 96-well plate and was incubated at 4° C. for overnight. Following the incubation, 200 μl of blocking buffer (5% BSA, 0.01% Tween 20 in borate saline 100 mM boric acid, 20 mM Na-borate and 0.7 mM NaCl) was used to block the plate at 37° C. for 1 h. Each well was then rinsed 3 times with rinsing buffer (1% BSA, 0.01% Tween 20 in borate saline). 100 μl of extravidin-HRP solution (1: 2,500 diluted extravidin-HRP in 3% BSA in 100 mM Tris-HCl, pH 7.4 and 5 mM EDTA) was added to each well and the plates were incubated overnight at 4° C. The plates were then washed four times with 50 mM Tris-HCl, pH 7.4. The signals were detected using OPD substrates and 3N HCl was used to stop the reaction and the reading was performed using the ELISA plate reader at 490 nm. Log P values were calculated as shown in the figure.

Results

The results are shown in FIG. 1.

Discussion

Exemplary TGase inhibitor compounds EB 1-155, 1-180 and 2-16 all have an acrylamide-based warhead, which enables them to enter cells and have greater inhibition of intracellular TG2 activity.

Exemplary TGase inhibitor compounds EB 1-159, 1-178 and 2-18 all have a sulphonamide-based warhead, which prevents them from entering cells and affecting intracellular TG2 activity levels.

Thus, by selecting an appropriate R3 group, the TGase inhibitor compounds of the invention may be targeted either to intracellular or extracellular TG2 enzymes. Extracellular activity is believed to be a more important target in fibrotic/angiogenic disease states. Also preventing inhibitors from entering cells limits intracellular-based off-target/toxicity effects.

Example 4 Selectivity of Inhibitors to Different Transglutaminases

This study demonstrates that different inhibitors exhibit varying selectivity towards different transglutaminases.

Methods

TG transamidation activity and the effect of inhibitors on activity was measured by biotin X-cadaverine incorporation into N,N′-dimethylcasein. After coating 96 well plates with 100 μl of 10 mg/ml N,N′-dimethylcasein in 50 mM Tris-Cl, pH8 at 4° C. over night, plates were washed with TBS-0.05% Tween-20(v/v), pH 7.6 and TBS, pH 7.6, and either 100 μl purified recombinant human TG2 (2 μg/ml Zedira, Germany) or 100 μl purified recombinant human FXIIIa (2 μg/ml Zedira, Germany, preactivated by incubation with 0.01 U bovine thrombin/μg FXIII at room temperature for 30 minutes) in 50 mM Tris-HCl, pH7.4, containing 1 mM DTT, 10 mM CaCl₂ and 0.1 μM biotin-cadaverine added into the coated wells containing the appropriate concentration of inhibitor. The reaction was allowed to proceed for 1 h at 37° C. The plate was then washed twice with TBS-Tween-20 (v/v), pH 7.6 and once with TBS, pH 7.6 before being blocked with 100 μl of blocking buffer (3% (w/v) BSA in TBS-Tween, pH 7.6) for 30 min at 37° C. After blocking, the wells were incubated with 100 μl HRP-conjugated ExtrAvidin peroxidase (Sigma-Aldrich, UK) in blocking buffer (1:1,000 dilution) for 1 h at 37° C. After another set of washes, TG2 activity was measured using Sigma Fast OPD, tablets dissolved in 20 ml of distilled H₂O. The colour was developed by adding 2.5M H₂SO₄ and the absorbance at 490 nm measured using a microplate reader ELx808™. All inhibitors were dissolved in DMSO as a 100 mM solution prior to addition to the assay.

Results

The results are shown in Table 6

TABLE 6 COMPOUND REF. TG2 IC50 (μm) FACTOR XIII IC50 (μm) EB 1-126 >500 15.5 ± 6.3 EB 1-127 >500 23.3 ± 5.5 EB 1-131 >500 13.5 ± 4.9 N.B. Errors shown are SD.

Discussion

The results demonstrate that the compounds of the invention exhibit different selectivity for different transglutaminases (notably, TG2 and Factor XIII). Whereas compounds EB 1-127, and 1-131 (which comprise a D-Phenylalanine moiety) and EB 1-126 (which comprises an L-Phenylalanine moiety) have negligible inhibitory effect on tissue transglutaminase (TG2), they are all very active against factor XIII. It is believed that the differential activity observed for some of the compounds may be due to the change in amino acids within the inhibitor structural core. These data indicate that the compounds of the invention may be “tuned” to inhibit specific TGs, in order to improve specificity and ultimate therapeutic value.

Example 5 Exemplary Pharmaceutical Formulations

The following examples illustrate pharmaceutical formulations according to the invention in which the active ingredient is a compound of the invention.

Example A: Tablet

Active ingredient 100 mg Lactose 200 mg Starch  50 mg Polyvinylpyrrolidone  5 mg Magnesium stearate  4 mg 359 mg

Tablets are prepared from the foregoing ingredients by wet granulation followed by compression.

Example B: Ophthalmic Solution

Active ingredient 0.5 g Sodium chloride, analytical grade 0.9 g Thiomersal 0.001 g Purified water to 100 ml pH adjusted to 7.5

Example C: Tablet Formulations

The following formulations A and B are prepared by wet granulation of the ingredients with a solution of povidone, followed by addition of magnesium stearate and compression.

Formulation A

mg/tablet mg/tablet Active ingredient 250 250 Lactose B.P. 210 26 Povidone B.P. 15 9 Sodium Starch Glycolate 20 12 Magnesium Stearate 5 3 500 300

Formulation B

mg/tablet mg/tablet Active ingredient 250 250 Lactose 150 — Avicel PH 101 ® 60 26 Povidone B.P. 15 9 Sodium Starch Glycolate 20 12 Magnesium Stearate 5 3 500 300

Formulation C

mg/tablet Active ingredient 100 Lactose 200 Starch 50 Povidone 5 Magnesium stearate 4 359

The following formulations, D and E, are prepared by direct compression of the admixed ingredients. The lactose used in formulation E is of the direction compression type.

Formulation D

mg/capsule Active Ingredient 250 Pre-gelatinised Starch NF15 150 400

Formulation E

mg/capsule Active Ingredient 250 Lactose 150 Avicel ® 100 500

Formulation F (Controlled Release Formulation)

The formulation is prepared by wet granulation of the ingredients (below) with a solution of povidone followed by the addition of magnesium stearate and compression.

mg/tablet Active Ingredient 500 Hydroxypropylmethylcellulose 112 (Methocel K4M Premium) ® Lactose B.P. 53 Povidone B.P.C. 28 Magnesium Stearate 7 700

Drug release takes place over a period of about 6-8 hours and was complete after 12 hours.

Example D: Capsule Formulations

Formulation A

A capsule formulation is prepared by admixing the ingredients of Formulation D in Example C above and filling into a two-part hard gelatin capsule. Formulation B (infra) is prepared in a similar manner.

Formulation B

mg/capsule (a) Active ingredient 250 (b) Lactose B.P. 143 (c) Sodium Starch Glycolate 25 (d) Magnesium Stearate 2 420

Formulation C

mg/capsule (a) Active ingredient 250 (b) Macrogol 4000 BP 350 600

Capsules are prepared by melting the Macrogel 4000 BP, dispersing the active ingredient in the melt and filling the melt into a two-part hard gelatin capsule.

Formulation D

mg/capsule Active ingredient 250 Lecithin 100 Arachis Oil 100 450

Capsules are prepared by dispersing the active ingredient in the lecithin and arachis oil and filling the dispersion into soft, elastic gelatin capsules.

Formulation E (Controlled Release Capsule)

The following controlled release capsule formulation is prepared by extruding ingredients a, b, and c using an extruder, followed by spheronisation of the extrudate and drying. The dried pellets are then coated with release-controlling membrane (d) and filled into a two-piece, hard gelatin capsule.

mg/capsule (a) Active ingredient 250 (b) Microcrystalline Cellulose 125 (c) Lactose BP 125 (d) Ethyl Cellulose 13 513

Example E: Injectable Formulation

Active ingredient 0.200 g Sterile, pyrogen free phosphate buffer (pH 7.0) to 10 ml

The active ingredient is dissolved in most of the phosphate buffer (35-40° C.), then made up to volume and filtered through a sterile micropore filter into a sterile 10 ml amber glass vial (type 1) and sealed with sterile closures and overseals.

Example F: Intramuscular injection

Active ingredient 0.20 g Benzyl Alcohol 0.10 g Glucofurol 75 ® 1.45 g Water for Injection q.s. to 3.00 ml

The active ingredient is dissolved in the glycofurol. The benzyl alcohol is then added and dissolved, and water added to 3 ml. The mixture is then filtered through a sterile micropore filter and sealed in sterile 3 ml glass vials (type 1).

Example G: Syrup Suspension

Active ingredient 0.2500 g Sorbitol Solution 1.5000 g Glycerol 2.0000 g Dispersible Cellulose 0.0750 g Sodium Benzoate 0.0050 g Flavour, Peach 17.42.3169 0.0125 ml Purified Water q.s. to 5.0000 ml

The sodium benzoate is dissolved in a portion of the purified water and the sorbitol solution added. The active ingredient is added and dispersed. In the glycerol is dispersed the thickener (dispersible cellulose). The two dispersions are mixed and made up to the required volume with the purified water. Further thickening is achieved as required by extra shearing of the suspension.

Example H: Suppository

mg/suppository Active ingredient (63 μm) 250 Hard Fat, BP (Witepsol H15 - Dynamit Nobel) 1770 2020

One fifth of the Witepsol H15 is melted in a steam jacketed pan at 45□C maximum. The active ingredient is sifted through a 200 μm sieve and added to the molten base with mixing, using a silverson fitted with a cutting head, until a smooth dispersion is achieved. Maintaining the mixture at 45° C., the remaining Witepsol H15 is added to the suspension and stirred to ensure a homogenous mix. The entire suspension is passed through a 250 μm stainless steel screen and, with continuous stirring, is allowed to cool to 40° C. At a temperature of 38° C. to 40° C. 2.02 g of the mixture is filled into suitable plastic moulds. The suppositories are allowed to cool to room temperature.

Example I: Pessaries

mg/pessary Active ingredient 250 Anhydrate Dextrose 380 Potato Starch 363 Magnesium Stearate 7 1000

The above ingredients are mixed directly and pessaries prepared by direct compression of the resulting mixture.

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1. A compound of Formula I

wherein R₁ is selected from the group consisting of R₄C(O)—, R₅OC(O)— and R₆S(O)₂— wherein R₄ is a lower alkyl group R₅ and R₆ are selected from the group consisting of heterocyclic groups, aralkyl groups and lower alkyl groups R₂ is a side chain of an amino acid; and R₃ is selected from the group consisting of —C(O)R₇ and —S(O)₂CHCH₂ wherein R₇ is selected from the group consisting of alkyl halide, alkylene dialkyl sulfonium, alkylenethioimidazolium, lower alkyl, lower alkenyl, epoxide and alkylene dihydroisoxazole groups or a pharmaceutically and/or veterinarily acceptable derivative thereof.
 2. A compound according to claim 1 wherein R₁ is R₄C(O)—.
 3. A compound according to claim 2 wherein R₄ is a cycloalkyl group (such as a fused ring).
 4. A compound according to claim 3 wherein R₄ is


5. A compound according to claim 1 wherein R₁ is R₅OC(O)—
 6. A compound according to claim 5 wherein R₅ is a heterocyclic group (such as a quinolyl group).
 7. A compound according to claim 5 wherein R₅ is an aralkyl group.
 8. A compound according to claim 7 wherein R₅ comprises a six- to ten-membered carbocyclic aromatic group.
 9. A compound according to claim 8 wherein R₅ comprises a phenyl or naphthyl group, linked to the ester moiety of R₅OC(O)— by a straight chain C₁ alkylene group.
 10. A compound according to claim 9 wherein the phenyl or naphthyl group is substituted with one or more ester substituent groups of formula R₈OOC—, wherein R₈ is a lower alkyl group.
 11. A compound according to claim 10 wherein R₈ is selected from the group consisting of methyl, ethyl, propyl and butyl groups.
 12. A compound according to claim 11 wherein R₅ is selected from the group consisting of


13. A compound according to claim 5 wherein R₅ is a lower alkyl group.
 14. A compound according to claim 13 wherein R₅ is a linear alkyl group.
 15. A compound according to claim 13 wherein R₅ is a branched alkyl group.
 16. A compound according to claim 15 wherein R₅ is —CR₉(R₁₀)(R₁₁), wherein R_(9,) R₁₀, and R₁₁ are each independently methyl or ethyl groups.
 17. A compound according to claim 16 wherein R₅ is


18. A compound according to claim 13 wherein R₅ is a fused ring.
 19. A compound according to claim 18 wherein R₅ is


20. A compound according to claim 1 wherein R₁ is R₆(O)₂—.
 21. A compound according to claim 20 wherein R₆ is a heterocyclic group.
 22. A compound according to claim 20 wherein R₆ is an aralkyl group.
 23. A compound according to claim 20 wherein R₆ is a lower alkyl group.
 24. A compound according to claim 23 wherein R₆ is a cycloalkyl group
 25. A compound according to claim 24 wherein R₆ comprises or consists of a phenyl or naphthyl group.
 26. A compound according to claim 25 wherein R₁ is a dansyl group.
 27. A compound according to claim 26 wherein R₁ is


28. A compound according to any one of the preceding claims wherein R₂ is a side chain of a naturally-occurring, proteinogenic amino acid.
 29. A compound according to claim 1 or 28 wherein the amino acid is selected from the group consisting of alanine, arginine, asparagine, aspartic acid, cysteine, glutamic acid, glutamine, glycine, histidine, isoleucine, leucine, lysine, methionine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine and valine.
 30. A compound according to claim 28 or 29 wherein R₂ is hydrogen.
 31. A compound according to claim 28 or 29 wherein R₂ is a lower alkyl group.
 32. A compound according to claim 31 wherein R₂ is a methyl group.
 33. A compound according to any one of the preceding claims wherein R₃ is —C(O)R₇, wherein R₇ is selected from the group consisting of alkyl halide, alkylene dialkyl sulfonium, alkylenethioimidazolium, lower alkyl, lower alkenyl, epoxide and alkylene dihydroisoxazole groups.
 34. A compound according to claim 33 wherein R₇ is an alkyl halide group.
 35. A compound according to claim 34 wherein the halide is bromide or chloride.
 36. A compound according to claim 35 wherein R₇ is


37. A compound according to claim 33 wherein R₇ is an alkylene dialkyl sulfonium group.
 38. A compound according to claim 37 wherein R₇ is


39. A compound according to claim 33 wherein R₇ is an alkylenethioimidazolium group.
 40. A compound according to claim 39 wherein R₇ is


41. A compound according to claim 33 wherein R₇ is a lower alkyl group.
 42. A compound according to claim 41 wherein R₇ is —CH₃.
 43. A compound according to claim 33 wherein R₇ is a lower alkenyl group.
 44. A compound according to claim 43 wherein R₇ is


45. A compound according to claim 33 wherein R₇ is an epoxide group.
 46. A compound according to claim 33 wherein R₇ is an alkylene dihydroisoxazole group.
 47. A compound according to claim 46 wherein R₇ is a methylene dihydroisoxazole group.
 48. A compound according to any one of claims 1 to 32 wherein R₃ is


49. A compound according to any one of the preceding claims wherein the compound exhibits an IC50 for human tissue transglutaminase of less than 100 μM, for example less than 50 μM, 40 μM, 30 μM, 20 μM, 10 μM, 5 μM, 4 μM, 3 μM, 2 μM or less than 1 μM.
 50. A compound according to claim 1 selected from the group of compounds shown in Tables 1 to
 3. 51. A pharmaceutical formulation comprising a compound according to any one of claims 1 to 50 and a pharmaceutically acceptable excipient, carrier or diluent.
 52. A method for making a compound according to any one of claims 1 to 50 comprising the following steps: (a) synthesis of a p-nitrophenylcarbonate; (b) piperazine alkylation of the p-nitrophenylcarbonate to produce a piperazine carboxylate; (c) peptide coupling of the piperazine carboxylate; and (d) carbamate deprotection of the product of step (c).
 53. A method according to claim 52 further comprising step (e) of acrylamide derivatisation of the product of step (d).
 54. A method according to claim 52 further comprising step (e) of acetylation of the product of step (d).
 55. A method according to claim 52 further comprising step (e) of producing a dialkylsulfonium salt of the product of step (d).
 56. A method according to claim 52 further comprising step (e) of producing a vinyl sulfonamide of the product of step (d).
 57. A compound according to any one of claims 1 to 50 for use in medicine.
 58. A compound according to any one of claims 1 to 50 for use in the treatment or prevention of a disease or condition which is responsive to treatment with an inhibitor of a transglutaminase.
 59. A compound according to claim 58 wherein the transglutaminase enzyme is tissue transglutaminase (TG2 or tTG).
 60. A compound according to claim 58 or 59 wherein the disease or condition is responsive to treatment with an angiogenesis inhibitor.
 61. A compound according to any one of claims 58 to 60 wherein the disease or condition is selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).
 62. A compound according to any one of claims 58 to 61 wherein the disease or condition is a fibrosis (such as cystic fibrosis).
 63. A compound according to any one of claims 58 to 61 wherein the disease or condition is a neurodegenerative disease (such as Alzheimer's disease, Huntington's disease or Parkinson's disease),
 64. A compound according to any one of claims 58 to 61 wherein the disease or condition is an autoimmune disease (such as multiple sclerosis or coeliac disease).
 65. A compound according to any one of claims 58 to 61 wherein the disease or condition is a cancer.
 66. A compound according to claim 65 wherein the cancer is associated with solid tumours.
 67. A compound according to claim 65 or 66 wherein the cancer is selected from the group consisting of prostate cancer, breast cancer, lung cancer, colorectal cancer, melanomas, bladder cancer, brain/CNS cancer, cervical cancer, oesophageal cancer, gastric cancer, head/neck cancer, kidney cancer, liver cancer, lymphomas, ovarian cancer, pancreatic cancer, and sarcomas.
 68. A compound according to any one of claims 58 to 61 wherein the disease or condition is associated with pathological angiogenesis.
 69. A compound according to claim 68 wherein the disease or condition is of the eye.
 70. A compound according to claim 69 wherein the disease or condition is a disease or disorder of the retina and/or choroid.
 71. A compound according to claim 70 wherein the disease or condition is a retinopathy.
 72. A compound according to claim 68 wherein the disease or condition is selected from the group consisting of diabetic retinopathy, age-related macular degeneration, retinopathy of prematurity, central retinal vein occlusion, sickle cell retinopathy, branch and central retinal vein occlusion and retinal trauma.
 73. A compound according to claim 68 wherein the disease or condition is selected from the group consisting of chronic inflammation or infection (e.g. HSV infection of the ocular surface resulting in blood vessel formation), corneal scarring, wound repair, pterygium and neovascular glaucoma (i.e. growth of blood vessels on iris and into anterior chamber angle; robeosis iridis).
 74. A compound according to claim 58 wherein the transglutaminase enzyme is factor XIII.
 75. A compound according to claim 74 wherein the disease or condition is associated with fibrin clot formation.
 76. Use of a compound according to any one of claims 1 to 50 in the preparation of a medicament for the treatment or prevention of a disease or condition which is responsive to treatment with an inhibitor of a transglutaminase enzyme.
 77. Use of a compound according to claim 76 wherein the transglutaminase enzyme is tissue transglutaminase (TG2 or tTG).
 78. Use of a compound according to claim 77 wherein the disease or condition is responsive to treatment with an angiogenesis inhibitor.
 79. Use of a compound according to claim 77 or 78 wherein the disease or condition is selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).
 80. A method of treating a subject in need of treatment with an inhibitor of a transglutaminase enzyme comprising administering to said subject a compound according to any one of claims 1 to 50 or a pharmaceutical formulation according to claim
 51. 81. A method according to claim 79 wherein the transglutaminase enzyme is tissue transglutaminase (TG2 or tTG).
 82. A method according to claim 81 wherein the compound or formulation is administered in an amount sufficient to inhibit, at least in part, tTGase-mediated protein modification.
 83. A method according to claim 81 wherein the compound or formulation is administered in an amount sufficient to inhibit, at least in part, angiogenesis.
 84. A method according to any one of claims 81 to 83 wherein the subject has a disease or condition selected from the group consisting of fibrosis (such as cystic fibrosis), scarring, neurodegenerative diseases (such as Alzheimer's disease, Huntington's disease and Parkinson's disease), autoimmune diseases (such as multiple sclerosis and coeliac disease), thrombosis, proliferative disorders (such as cancers), AIDS, psoriasis and inflammation (such as a chronic inflammatory disease).
 85. A method according to any one of claims 81 to 84 wherein the subject is human.
 86. A method according to any one of claims 81 to 85 wherein the compound or formulation is administered repeatedly.
 87. A method according to any one of claims 81 to 86 wherein compound or formulation is administered systemically.
 88. A method according to any one of claims 81 to 87 wherein the compound or formulation is administered at or near a site of TGase-mediated protein modification.
 89. A method according to any one of claims 81 to 88 wherein the compound or formulation is administered at or near a site of pathological angiogenesis.
 90. A compound according to any one of claims 1 to 50 for preventing or treating rejection of a transplanted organ.
 91. Use of a compound according to any one of claims 1 to 50 in the preparation of a medicament for preventing or treating rejection of a transplanted organ.
 92. A method for preventing or treating rejection of a transplanted organ comprising contacting the organ with a compound according to any one of claims 1 to
 50. 93. A method according to claim 90 wherein the organ is a heart, lung, kidney or liver.
 94. A method or use according to claim 91 wherein the organ is treated prior to transplantation.
 95. A method or use according to claim 91 or 92 wherein the organ is treated during and/or after transplantation into a patient.
 96. A compound substantially as described herein with reference to the Examples. 